Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF541 and GFF542 are separated by 28 nucleotidesGFF542 and GFF543 are separated by 279 nucleotidesGFF543 and GFF544 overlap by 13 nucleotidesGFF544 and GFF545 are separated by 198 nucleotides GFF541 - Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase, at 580,377 to 581,102 GFF541 GFF542 - no description, at 581,131 to 581,757 GFF542 GFF543 - Uncharacterized deacetylase PA5390, at 582,037 to 583,191 GFF543 GFF544 - Isoleucyl-tRNA synthetase (EC 6.1.1.5), at 583,179 to 585,959 GFF544 GFF545 - hypothetical protein, at 586,158 to 587,525 GFF545
Group Condition GFF541 GFF542 GFF543 GFF544 GFF545
complex community Community=Locust bean gum; Passage=4 +0.1 -0.6 -0.7 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 -1.1 +0.0 +0.1
phage phage_bap4 -0.2 -0.6 -0.2 -0.1 -0.1
complex community Community=guar; Passage=4 -0.3 -0.2 -0.6 -0.1 +0.1
phage phage_bap4 -0.1 -0.2 -0.4 -0.3 -0.0
phage phage_bap4 -0.1 -0.4 -0.1 -0.1 -0.1
complex community Community=guar; Passage=4 -0.4 -0.3 -0.2 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 -0.1 -0.0 -0.1
phage phage_bap4 -0.0 -0.3 -0.1 -0.1 -0.1
no phage control no phage control -0.2 -0.2 -0.2 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.3 -0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.4 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.4 +0.1 -0.1 +0.0
complex community Community=Kojac gum; Passage=4 +0.2 -0.3 -0.0 +0.0 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -1.2 +0.7 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.0 -0.6 +0.2 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 -0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.3 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.4 +0.1 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 -0.4 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.3 +0.1 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.0 +0.2 -0.1 +0.0
complex community Community=guar; Passage=4 -0.1 -0.2 +0.5 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.2 +0.3 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 -0.1 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.4 +0.1 +0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.2 +0.3 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 +0.4 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 +0.4 +0.2 +0.1 -0.1
complex community Community=guar; Passage=4 -0.2 +0.3 +0.5 +0.2 +0.1
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