Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5406 and GFF5407 are separated by 119 nucleotidesGFF5407 and GFF5408 are separated by 26 nucleotidesGFF5408 and GFF5409 are separated by 66 nucleotidesGFF5409 and GFF5410 are separated by 51 nucleotides GFF5406 - Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5), at 29,918 to 30,811 GFF5406 GFF5407 - Membrane protein TerC, possibly involved in tellurium resistance, at 30,931 to 31,614 GFF5407 GFF5408 - Protein serine/threonine phosphatase PrpC, regulation of stationary phase, at 31,641 to 32,450 GFF5408 GFF5409 - FIG00576366: hypothetical protein, at 32,517 to 33,161 GFF5409 GFF5410 - Adenylate cyclase (EC 4.6.1.1), at 33,213 to 35,465 GFF5410
Group Condition GFF5406 GFF5407 GFF5408 GFF5409 GFF5410
phage phage_bap4 N.D. -0.2 -0.5 +0.0 +0.0
phage phage_bap4 N.D. -0.2 -0.5 -0.0 +0.1
phage phage_bap4 N.D. -0.2 -0.5 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.1 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.2 -0.4 +0.0 +0.2
complex community Community=Kojac gum; Passage=1 N.D. -0.1 -0.2 -0.1 +0.1
phage phage_bap4 N.D. -0.1 -0.4 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.0 -0.1 +0.0 -0.2
complex community Community=guar; Passage=4 N.D. -0.2 -0.3 +0.1 +0.2
no phage control no phage control N.D. -0.1 -0.2 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. +0.1 -0.1 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.1 -0.1 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 +0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 -0.0 -0.0 -0.2
phage phage_bap4 N.D. -0.1 -0.4 +0.1 +0.5
phage phage_bap4 N.D. -0.1 -0.4 +0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.1 +0.1 +0.1 -0.1
phage phage_bap4 N.D. +0.0 -0.2 +0.0 +0.4
phage phage_bap4 N.D. -0.1 -0.4 +0.1 +0.6
complex community Community=guar; Passage=4 N.D. -0.4 -0.0 +0.2 +0.5
complex community Community=arabino-guar; Passage=4 N.D. -0.3 -0.1 +0.3 +0.4
vitamin M9 with Supernatant from Cyptococcus N.D. +0.2 -0.0 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 +0.2 +0.0 +0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.3 -0.1 +0.3 +0.6
complex community Community=guar; Passage=4 N.D. -0.2 +0.2 +0.0 +0.4
complex community Community=guar; Passage=4 N.D. -0.1 -0.1 +0.3 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.0 -0.1 +0.4 +0.6
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.2 +0.7 +0.7
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.0 +0.4 +0.8
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 +0.2 +0.4 +0.7
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