Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF538 and GFF539 are separated by 15 nucleotidesGFF539 and GFF540 are separated by 80 nucleotidesGFF540 and GFF541 are separated by 24 nucleotidesGFF541 and GFF542 are separated by 28 nucleotides GFF538 - FIG00454528: hypothetical protein, at 578,242 to 579,054 GFF538 GFF539 - no description, at 579,070 to 579,369 GFF539 GFF540 - Permease of the drug/metabolite transporter (DMT) superfamily, at 579,450 to 580,352 GFF540 GFF541 - Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase, at 580,377 to 581,102 GFF541 GFF542 - no description, at 581,131 to 581,757 GFF542
Group Condition GFF538 GFF539 GFF540 GFF541 GFF542
complex community Community=arabino-guar; Passage=4 -0.1 -0.3 -0.0 -0.0 -0.6
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.0 +0.2 -1.2
phage phage_bap4 +0.0 -0.1 -0.1 -0.2 -0.6
complex community Community=guar; Passage=4 +0.2 -0.2 -0.2 -0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.2 +0.0 -0.2 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 +0.0 +0.1 -0.6
complex community Community=guar; Passage=4 -0.2 -0.1 +0.0 -0.1 -0.2
phage phage_bap4 -0.1 +0.0 +0.0 -0.1 -0.4
phage phage_bap4 -0.0 -0.1 -0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 +0.0 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 +0.1 +0.1 -0.4
complex community Community=guar; Passage=4 +0.1 +0.2 -0.1 -0.4 -0.3
phage phage_bap4 +0.0 -0.1 -0.0 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.0 +0.0 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 -0.0 +0.0 -0.4
complex community Community=arabino-guar; Passage=4 +0.3 -0.3 -0.2 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.0 -0.0 -0.1 -0.2
no phage control no phage control +0.0 +0.0 +0.1 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 +0.3 -0.2 -0.1
complex community Community=Kojac gum; Passage=4 -0.1 +0.1 -0.0 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.1 +0.1 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.0 -0.6 +0.1 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 +0.1 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.1 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 -0.1 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.0 +0.1 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 -0.2 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.1 +0.1 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 +0.1 +0.0 +0.3
complex community Community=guar; Passage=4 +0.2 +0.1 +0.1 -0.2 +0.3
remove
GFF538
plot
remove
GFF539
plot
remove
GFF540
remove
GFF541
plot
remove
GFF542
plot