Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5385 and GFF5386 are separated by 4 nucleotidesGFF5386 and GFF5387 are separated by 25 nucleotidesGFF5387 and GFF5388 are separated by 26 nucleotidesGFF5388 and GFF5389 are separated by 218 nucleotides GFF5385 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 2,387,925 to 2,388,764 GFF5385 GFF5386 - Aldehyde dehydrogenase B (EC 1.2.1.22), at 2,388,769 to 2,390,214 GFF5386 GFF5387 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,390,240 to 2,390,974 GFF5387 GFF5388 - Tricarboxylate transport protein TctC, at 2,391,001 to 2,391,840 GFF5388 GFF5389 - Arylsulfatase (EC 3.1.6.1), at 2,392,059 to 2,394,305 GFF5389
Group Condition GFF5385 GFF5386 GFF5387 GFF5388 GFF5389
carbon source Ying_all64 rep C; time point 2 N.D. -0.4 -1.2 N.D. +0.0
carbon source Ying_OrganicAcid7 rep B; time point 1 N.D. +0.1 -1.1 N.D. -0.3
carbon source Ying_all64 rep C; time point 1 N.D. +0.3 -1.0 N.D. -0.3
carbon source Ying_all64 rep B; time point 1 N.D. +0.3 -1.1 N.D. -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. -0.6 -0.1 N.D. -0.1
carbon source Ying_Others16 rep A; time point 1 N.D. -0.0 -0.5 N.D. -0.2
carbon source Ying_AminoAcid20 rep B; time point 2 N.D. -0.3 -0.5 N.D. -0.0
carbon source Ying_AminoAcid20 rep A; time point 1 N.D. +0.0 -0.8 N.D. +0.0
carbon source Ying_Others16 rep B; time point 1 N.D. +0.4 -0.8 N.D. -0.2
carbon source Ying_OrganicAcid7 rep A; time point 3 N.D. -0.6 -0.1 N.D. +0.3
carbon source Ying_Others16 rep A; time point 2 N.D. +0.2 -0.3 N.D. -0.3
carbon source Ying_AminoAcid20 rep A; time point 2 N.D. +0.2 -0.3 N.D. -0.2
carbon source Ying_AminoAcid20 rep B; time point 1 N.D. +0.3 -0.3 N.D. -0.2
carbon source Ying_Nucleobase14 rep B; time point 1 N.D. +0.3 -0.3 N.D. -0.1
carbon source Ying_all64 rep C; time point 3 N.D. -0.2 -0.3 N.D. +0.4
carbon source Ying_Others16 rep C; time point 1 N.D. +0.5 -0.5 N.D. -0.1
carbon source Ying_Others16 rep C; time point 3 N.D. -0.5 +0.3 N.D. +0.1
carbon source Ying_all64 rep A; time point 2 N.D. +0.5 -0.3 N.D. -0.2
carbon source Ying_Nucleobase14 rep C; time point 2 N.D. +0.7 -0.4 N.D. -0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 N.D. +0.2 +0.3 N.D. -0.3
carbon source Ying_sugar7 rep C; time point 1 N.D. +0.7 -0.3 N.D. -0.1
carbon source Ying_sugar7 rep A; time point 2 N.D. +0.5 -0.3 N.D. +0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 N.D. +0.6 -0.3 N.D. +0.2
carbon source Ying_Others16 rep B; time point 3 N.D. +0.3 -0.0 N.D. +0.3
carbon source Ying_sugar7 rep A; time point 3 N.D. +0.2 +0.3 N.D. +0.2
carbon source Ying_sugar7 rep C; time point 2 N.D. +0.7 +0.1 N.D. -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 N.D. +0.5 +0.3 N.D. +0.1
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. +0.5 +0.3 N.D. +0.1
carbon source Ying_sugar7 rep C; time point 3 N.D. -0.4 +1.0 N.D. +0.3
carbon source Ying_Others16 rep A; time point 3 N.D. +0.6 +0.5 N.D. +0.4
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