Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5384 and GFF5385 overlap by 4 nucleotidesGFF5385 and GFF5386 are separated by 4 nucleotidesGFF5386 and GFF5387 are separated by 25 nucleotidesGFF5387 and GFF5388 are separated by 26 nucleotides GFF5384 - D-2-hydroxyglutarate dehydrogenase, at 2,386,528 to 2,387,928 GFF5384 GFF5385 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 2,387,925 to 2,388,764 GFF5385 GFF5386 - Aldehyde dehydrogenase B (EC 1.2.1.22), at 2,388,769 to 2,390,214 GFF5386 GFF5387 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 2,390,240 to 2,390,974 GFF5387 GFF5388 - Tricarboxylate transport protein TctC, at 2,391,001 to 2,391,840 GFF5388
Group Condition GFF5384 GFF5385 GFF5386 GFF5387 GFF5388
carbon source Ying_all64 rep C; time point 2 +0.1 N.D. -0.4 -1.2 N.D.
carbon source Ying_AminoAcid20 rep A; time point 1 -0.4 N.D. +0.0 -0.8 N.D.
carbon source Ying_all64 rep A; time point 1 -0.7 N.D. +0.1 -0.5 N.D.
carbon source Ying_all64 rep C; time point 1 -0.2 N.D. +0.3 -1.0 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -0.2 N.D. -0.3 -0.5 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.1 N.D. +0.1 -1.1 N.D.
carbon source Ying_Others16 rep A; time point 1 -0.3 N.D. -0.0 -0.5 N.D.
carbon source Ying_all64 rep B; time point 1 -0.1 N.D. +0.3 -1.1 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.0 N.D. -0.6 -0.1 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 N.D. -0.6 -0.1 N.D.
carbon source Ying_Others16 rep B; time point 1 -0.2 N.D. +0.4 -0.8 N.D.
carbon source Ying_Nucleobase14 rep A; time point 1 -0.2 N.D. -0.3 +0.1 N.D.
carbon source Ying_Others16 rep C; time point 1 -0.3 N.D. +0.5 -0.5 N.D.
carbon source Ying_AminoAcid20 rep B; time point 1 -0.1 N.D. +0.3 -0.3 N.D.
carbon source Ying_Others16 rep C; time point 3 +0.1 N.D. -0.5 +0.3 N.D.
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 N.D. +0.3 -0.3 N.D.
carbon source Ying_sugar7 rep B; time point 1 +0.3 N.D. +0.2 -0.4 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 -0.2 N.D. +0.5 -0.1 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 -0.1 N.D. +0.7 -0.4 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 N.D. +0.6 -0.3 N.D.
carbon source Ying_all64 rep A; time point 2 +0.1 N.D. +0.5 -0.3 N.D.
carbon source Ying_sugar7 rep C; time point 1 +0.0 N.D. +0.7 -0.3 N.D.
carbon source Ying_sugar7 rep A; time point 2 +0.2 N.D. +0.5 -0.3 N.D.
carbon source Ying_sugar7 rep C; time point 2 -0.2 N.D. +0.7 +0.1 N.D.
carbon source Ying_Others16 rep B; time point 3 +0.4 N.D. +0.3 -0.0 N.D.
carbon source Ying_sugar7 rep C; time point 3 +0.2 N.D. -0.4 +1.0 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 +0.1 N.D. +0.5 +0.3 N.D.
carbon source Ying_sugar7 rep A; time point 3 +0.4 N.D. +0.2 +0.3 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.2 N.D. +0.5 +0.3 N.D.
carbon source Ying_Others16 rep A; time point 3 -0.0 N.D. +0.6 +0.5 N.D.
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