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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5363 and GFF5364 overlap by 4 nucleotides
GFF5364 and GFF5365 overlap by 9 nucleotides
GFF5365 and GFF5366 are separated by 70 nucleotides
GFF5366 and GFF5367 are separated by 215 nucleotides
GFF5363 - Drug resistance transporter, Bcr/CflA family, at 2,366,181 to 2,367,359
GFF5363
GFF5364 - FIG00461527: hypothetical protein, at 2,367,356 to 2,367,754
GFF5364
GFF5365 - hypothetical protein, at 2,367,746 to 2,367,940
GFF5365
GFF5366 - Beta-lactamase class C and other penicillin binding proteins, at 2,368,011 to 2,369,111
GFF5366
GFF5367 - 3-demethylubiquinone-9 3-methyltransferase, at 2,369,327 to 2,369,806
GFF5367
Group
Condition
GFF5363
GFF5364
GFF5365
GFF5366
GFF5367
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.1
-0.2
-0.2
+0.1
-0.7
carbon source
Ying_Others16 rep A; time point 1
-0.0
+0.1
+0.1
-0.1
-0.7
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.2
-0.3
-0.1
+0.2
-0.4
carbon source
Ying_sugar7 rep B; time point 1
+0.0
+0.1
-0.2
+0.2
-0.5
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.2
+0.0
+0.1
-0.1
-0.6
carbon source
Ying_Nucleobase14 rep A; time point 1
-0.2
-0.2
-0.1
-0.1
+0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.2
-0.1
+0.2
+0.1
+0.2
carbon source
Ying_Others16 rep A; time point 3
+0.1
+0.2
+0.2
+0.1
-0.4
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.0
-0.2
+0.1
+0.3
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.1
-0.3
+0.0
+0.3
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.2
+0.1
+0.2
-0.0
-0.2
carbon source
Ying_sugar7 rep B; time point 2
+0.3
+0.3
-0.0
+0.1
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.3
+0.3
+0.2
-0.2
-0.1
carbon source
Ying_Others16 rep C; time point 2
-0.0
-0.3
+0.1
+0.1
+0.6
carbon source
Ying_sugar7 rep C; time point 3
+0.1
+0.1
+0.1
-0.1
+0.4
carbon source
Ying_OrganicAcid7 rep B; time point 1
+0.1
+0.2
+0.2
-0.1
+0.1
carbon source
Ying_sugar7 rep B; time point 3
+0.0
+0.3
+0.2
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.2
+0.5
+0.1
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
+0.1
+0.1
+0.2
+0.1
+0.1
carbon source
Ying_sugar7 rep A; time point 3
+0.2
+0.4
+0.3
+0.2
-0.3
carbon source
Ying_all64 rep C; time point 1
+0.2
+0.1
+0.2
-0.0
+0.2
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.2
+0.3
+0.3
-0.0
+0.0
carbon source
Ying_all64 rep B; time point 1
-0.1
+0.2
+0.2
+0.1
+0.3
carbon source
Ying_all64 rep C; time point 2
+0.2
+0.1
+0.1
+0.1
+0.3
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.0
+0.2
+0.6
+0.1
+0.1
carbon source
Ying_all64 rep B; time point 3
+0.2
+0.3
+0.3
+0.2
+0.1
carbon source
Ying_Others16 rep B; time point 3
+0.0
+0.5
+0.3
+0.2
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.1
+0.0
-0.1
+0.2
+0.8
carbon source
Ying_all64 rep C; time point 3
+0.4
+0.3
+0.2
+0.3
-0.3
carbon source
Ying_AminoAcid20 rep C; time point 3
-0.1
+0.4
+0.2
+0.3
+0.6
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