Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF534 and GFF535 are separated by 137 nucleotidesGFF535 and GFF536 are separated by 130 nucleotidesGFF536 and GFF537 are separated by 15 nucleotidesGFF537 and GFF538 are separated by 48 nucleotides GFF534 - Two-component system sensor histidine kinase, at 573,913 to 575,925 GFF534 GFF535 - Transcriptional regulator, AraC family, at 576,063 to 576,902 GFF535 GFF536 - no description, at 577,033 to 577,185 GFF536 GFF537 - FIG00453455: hypothetical protein, at 577,201 to 578,193 GFF537 GFF538 - FIG00454528: hypothetical protein, at 578,242 to 579,054 GFF538
Group Condition GFF534 GFF535 GFF536 GFF537 GFF538
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 -1.1 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.1 -1.4 +0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 +0.3 -0.9 -0.4 +0.1
complex community Community=guar; Passage=4 -0.0 +0.1 -1.0 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.0 -0.4 -0.6 -0.1
phage phage_bap4 -0.1 -0.0 -0.5 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -0.4 +0.0 -0.0
phage phage_bap4 -0.1 -0.1 -0.1 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.0 -0.4 -0.0 -0.0
no phage control no phage control -0.1 -0.1 -0.5 +0.2 +0.0
complex community Community=guar; Passage=4 +0.0 +0.2 -0.7 +0.2 -0.2
phage phage_bap4 -0.4 -0.0 +0.3 -0.0 -0.2
phage phage_bap4 -0.3 -0.0 -0.2 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.3 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 +0.2 -0.1 -0.1
complex community Community=guar; Passage=4 -0.0 +0.1 -0.3 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 -0.2 +0.1 +0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 -0.1 -0.2 +0.3
complex community Community=guar; Passage=4 -0.2 +0.1 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.2 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.0 +0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.0 +0.4 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.0 +0.5 -0.0 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.1 +0.2 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.0 +0.3 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.3 +0.1 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 +0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.1 +0.4 +0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.2 +0.7 +0.1 -0.1
complex community Community=Kojac gum; Passage=4 +0.1 +0.0 +0.8 +0.3 -0.1
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