Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5350 and GFF5351 are separated by 63 nucleotidesGFF5351 and GFF5352 are separated by 34 nucleotidesGFF5352 and GFF5353 are separated by 21 nucleotidesGFF5353 and GFF5354 overlap by 4 nucleotides GFF5350 - Imidazole glycerol phosphate synthase amidotransferase subunit HisH, at 227,670 to 228,326 GFF5350 GFF5351 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 228,390 to 229,130 GFF5351 GFF5352 - Split AAA-ATPase protein PA0787, at 229,165 to 230,337 GFF5352 GFF5353 - Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4), at 230,359 to 231,267 GFF5353 GFF5354 - C4-dicarboxylate transport protein, at 231,264 to 232,571 GFF5354
Group Condition GFF5350 GFF5351 GFF5352 GFF5353 GFF5354
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.1 -0.5 -0.4
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.2 +0.1 -0.5
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.7 +0.3 -0.2
complex community Community=guar; Passage=4 N.D. N.D. -0.1 -0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.0 -0.3 -0.1
complex community Community=guar; Passage=4 N.D. N.D. -0.2 +0.3 -0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 -0.3 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.5 -0.7 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.2 +0.1 -0.2
complex community Community=guar; Passage=4 N.D. N.D. +0.1 -0.4 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.2 +0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. +0.1 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.3 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.2 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.2 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.4 +0.0 -0.2
no phage control no phage control N.D. N.D. +0.1 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.2 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.4 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.4 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. +0.2 +0.2 +0.1
phage phage_bap4 N.D. N.D. +0.1 +0.3 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.1 +0.7 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.4 -0.2 +0.5
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