Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF5350 and GFF5351 are separated by 5 nucleotidesGFF5351 and GFF5352 are separated by 228 nucleotidesGFF5352 and GFF5353 are separated by 63 nucleotidesGFF5353 and GFF5354 overlap by 8 nucleotides GFF5350 - 5-oxoprolinase (EC 3.5.2.9), at 2,351,008 to 2,354,595 GFF5350 GFF5351 - Predicted transcription regulator, contains HTH domain (MarR family), at 2,354,601 to 2,355,089 GFF5351 GFF5352 - TRAP transporter solute receptor, unknown substrate 5, at 2,355,318 to 2,356,292 GFF5352 GFF5353 - TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5, at 2,356,356 to 2,356,859 GFF5353 GFF5354 - TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5, at 2,356,852 to 2,358,147 GFF5354
Group Condition GFF5350 GFF5351 GFF5352 GFF5353 GFF5354
carbon source Ying_Nucleobase14 rep A; time point 2 -0.9 -2.0 +0.2 -0.3 +0.3
carbon source Ying_Nucleobase14 rep B; time point 2 -1.0 -1.9 +0.2 +0.2 +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 -1.0 -1.6 +0.2 +0.7 +0.1
carbon source Ying_AminoAcid20 rep B; time point 3 -0.2 -0.4 -0.2 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.1 -0.4 -0.1 -0.6 +0.1
carbon source Ying_Others16 rep C; time point 3 -0.2 -0.4 -0.2 +0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.5 -0.1 -0.1 -0.2
carbon source Ying_Others16 rep B; time point 2 -0.2 -0.4 +0.0 -0.3 +0.1
carbon source Ying_Others16 rep C; time point 2 -0.0 -0.3 +0.1 -0.4 +0.0
carbon source Ying_Nucleobase14 rep A; time point 1 -0.6 -0.8 +0.2 +0.5 +0.2
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 -0.5 -0.1 +0.1 +0.1
carbon source Ying_Nucleobase14 rep B; time point 1 -0.4 -0.7 +0.2 +0.1 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.4 -0.4 -0.2 +0.1 -0.3
carbon source Ying_Nucleobase14 rep C; time point 1 -0.4 -0.6 +0.1 +0.4 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.3 -0.1 +0.2 -0.1 +0.0
carbon source Ying_all64 rep A; time point 1 -0.2 -0.1 +0.1 -0.2 +0.1
carbon source Ying_AminoAcid20 rep C; time point 1 -0.1 -0.3 +0.0 +0.2 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.2 -0.2 +0.1 +0.2 +0.1
carbon source Ying_all64 rep C; time point 3 +0.4 +0.3 -0.1 -0.4 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.0 -0.2 +0.2 -0.2 +0.1
carbon source Ying_AminoAcid20 rep B; time point 2 -0.2 -0.3 -0.0 +0.4 +0.2
carbon source Ying_AminoAcid20 rep A; time point 2 -0.2 -0.3 +0.1 +0.3 +0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -0.2 -0.1 -0.0 +0.3 +0.2
carbon source Ying_AminoAcid20 rep A; time point 1 -0.1 -0.1 -0.0 +0.6 -0.0
carbon source Ying_sugar7 rep B; time point 1 +0.0 +0.0 +0.2 -0.2 +0.3
carbon source Ying_all64 rep B; time point 2 -0.3 +0.2 +0.1 +0.3 +0.2
carbon source Ying_all64 rep B; time point 1 -0.1 +0.1 +0.1 +0.6 -0.1
carbon source Ying_sugar7 rep B; time point 2 +0.1 -0.0 +0.2 +0.3 +0.2
carbon source Ying_sugar7 rep A; time point 2 +0.2 +0.2 +0.1 +0.0 +0.2
carbon source Ying_all64 rep C; time point 2 +0.2 +0.5 -0.0 +0.2 +0.1
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