Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5347 and GFF5348 overlap by 4 nucleotidesGFF5348 and GFF5349 overlap by 4 nucleotidesGFF5349 and GFF5350 are separated by 19 nucleotidesGFF5350 and GFF5351 are separated by 63 nucleotides GFF5347 - hypothetical protein, at 225,598 to 225,948 GFF5347 GFF5348 - Histidinol-phosphate aminotransferase (EC 2.6.1.9), at 225,945 to 227,036 GFF5348 GFF5349 - Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 227,033 to 227,650 GFF5349 GFF5350 - Imidazole glycerol phosphate synthase amidotransferase subunit HisH, at 227,670 to 228,326 GFF5350 GFF5351 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 228,390 to 229,130 GFF5351
Group Condition GFF5347 GFF5348 GFF5349 GFF5350 GFF5351
complex community Community=guar; Passage=4 -0.1 -0.5 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.1 -0.5 N.D. N.D. N.D.
phage phage_bap4 -0.2 -0.3 N.D. N.D. N.D.
phage phage_bap4 -0.2 -0.3 N.D. N.D. N.D.
phage phage_bap4 -0.2 -0.2 N.D. N.D. N.D.
complex community Community=guar; Passage=4 +0.0 -0.4 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.4 N.D. N.D. N.D.
phage phage_bap4 -0.1 -0.1 N.D. N.D. N.D.
complex community Community=guar; Passage=4 +0.2 -0.4 N.D. N.D. N.D.
complex community Community=guar; Passage=4 +0.2 -0.4 N.D. N.D. N.D.
phage phage_bap4 -0.0 -0.1 N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=4 +0.1 -0.3 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.2 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 -0.0 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.0 N.D. N.D. N.D.
remove
GFF5347
plot
remove
GFF5348
plot
remove
GFF5349
remove
GFF5350
plot
remove
GFF5351
plot