Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5343 and GFF5344 overlap by 4 nucleotidesGFF5344 and GFF5345 are separated by 20 nucleotidesGFF5345 and GFF5346 are separated by 32 nucleotidesGFF5346 and GFF5347 are separated by 10 nucleotides GFF5343 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7), at 221,469 to 222,761 GFF5343 GFF5344 - ATP phosphoribosyltransferase (EC 2.4.2.17) => HisGs, at 222,758 to 223,399 GFF5344 GFF5345 - Histidinol dehydrogenase (EC 1.1.1.23), at 223,420 to 224,742 GFF5345 GFF5346 - Putative outer membrane lipoprotein, at 224,775 to 225,587 GFF5346 GFF5347 - hypothetical protein, at 225,598 to 225,948 GFF5347
Group Condition GFF5343 GFF5344 GFF5345 GFF5346 GFF5347
phage phage_bap4 N.D. N.D. N.D. -0.2 -0.2
phage phage_bap4 N.D. N.D. N.D. -0.0 -0.2
phage phage_bap4 N.D. N.D. N.D. -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. N.D. -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. N.D. -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. N.D. -0.2 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. -0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. N.D. -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. N.D. N.D. -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. -0.3 +0.3
phage phage_bap4 N.D. N.D. N.D. +0.2 -0.1
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.1 -0.1
complex community Community=guar; Passage=4 N.D. N.D. N.D. -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. N.D. -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. +0.1 +0.1
phage phage_bap4 N.D. N.D. N.D. +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. +0.0 +0.2
no phage control no phage control N.D. N.D. N.D. +0.2 +0.0
phage phage_bap4 N.D. N.D. N.D. +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. N.D. +0.1 +0.2
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. +0.3 +0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. +0.4 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.6 +0.3
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