Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27330	PS417_27335	PS417_27340	PS417_27345	PS417_27350
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-1.1	-0.6	+0.0	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+0.3	-0.9	-0.0	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	+0.5	-2.2	-0.1	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.0	+0.3	-1.8	+0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-1.0	-0.8	+0.5	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-1.3	-0.2	+0.2	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-1.2	+0.2	+0.0	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.5	-1.1	+0.2	-0.1
phage	JP1 MOI 10	-0.1	+0.8	-0.9	+0.2	-0.1
phage	JP1 MOI 10	-0.3	+1.3	-0.8	+0.0	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	+0.3	+0.5	-1.0	+0.1	+0.4
phage	JP1 MOI 1	+0.1	+1.1	+0.3	-0.2	-0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-0.8	+1.0	+0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	-1.4	+0.8	+0.2	+0.5
agar plate interaction control	Taped volatile agar plate with no fungus	+0.3	+0.0	-0.6	-0.0	+1.2
soil	soil sample 4; outgrowth in LB	-0.1	+0.9	-0.7	+0.3	+0.4
soil	soil sample 7; outgrowth in LB	+0.2	+0.8	-0.6	+0.5	+0.0
nophagecontrol	Only library	+0.0	+1.1	+0.6	-0.2	-0.6
soil	soil sample 2; outgrowth in LB	+0.4	+0.7	-0.6	+0.4	+0.3
phage	JP1 MOI 0.1	-0.1	+0.9	+1.0	+0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.5	+0.7	-1.1	+0.2	-0.0
stress	1-ethyl-3-methylimidazolium chloride 200 mM	-0.2	+1.3	+0.5	+0.2	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.2	+0.3	+0.1	+0.4	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.2	-0.1	-0.1	+0.1	+0.7
stress	Choline chloride 300 mM	-0.0	+1.5	+0.6	+0.0	-0.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.3	+1.1	+0.9	+0.1	+0.0
stress	Bacitracin 1 mg/ml	+0.2	+0.3	+0.2	+2.5	+0.2
stress	Phosphomycin 0.002 mg/ml	+0.4	+1.1	+1.5	+9.1	+1.1
stress	Phosphomycin 0.001 mg/ml	+0.3	+1.0	+1.2	+10.0	+0.8
stress	Phosphomycin 0.003 mg/ml	+0.4	+1.4	+1.6	+9.4	+1.2