Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27280	PS417_27285	PS417_27290	PS417_27295	PS417_27300
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.5	-5.2	+0.5	-4.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.8	-5.4	+0.1	-4.5
solid stress	Fraxetin 2 mM; solid stress	N.D.	+0.5	-5.4	-1.5	-1.3
solid stress	Fraxetin 3 mM; solid stress	N.D.	+1.0	-5.2	-3.3	-0.1
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	+0.1	-1.5	-1.4	-2.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.5	-0.8	+0.1	-4.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.6	-0.1	-0.0	-4.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.0	+0.3	-0.9	-4.4
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	+0.1	+0.2	-0.7	-4.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	+0.0	-0.4	-0.6	-3.9
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	+0.1	-0.3	-1.0	-3.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.6	-0.2	+0.5	-4.5
stress	methylglyoxal 0.032 vol%	N.D.	-0.3	+0.9	-0.9	-4.2
liquid stress	Scopoletin 3 mM; liquid stress	N.D.	+0.0	+0.7	-0.6	-4.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	+0.6	+0.1	-4.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	-0.2	+0.5	+0.0	-4.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.7	-0.1	-0.0	-4.5
soil	soil sample 3; outgrowth in LB	N.D.	-0.4	+1.3	-0.4	-4.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.7	+0.4	-0.1	-4.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.1	-0.5	+1.5	-4.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.6	+0.5	-0.1	-4.4
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.9	-0.2	-3.1	-1.0
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.9	-1.1	-2.8	-0.2
soil	soil sample 7; outgrowth in LB	N.D.	-0.0	+1.3	+0.4	-4.7
root	root sample 6; outgrowth in LB	N.D.	-0.4	+0.4	+1.6	-3.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	-0.1	+0.8	+1.2	-3.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.7	-1.3	-1.2	+1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.1	-1.5	+1.5	+3.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.2	-1.6	+1.6	+3.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.0	-1.2	+1.6	+3.2