Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27270	PS417_27275	PS417_27280	PS417_27285	PS417_27290
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.3	N.D.	+0.8	-5.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+0.1	N.D.	-0.5	-5.2
solid stress	Fraxetin 2 mM; solid stress	N.D.	+0.1	N.D.	+0.5	-5.4
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.0	N.D.	+1.0	-5.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	N.D.	-0.3	N.D.	+0.1	-3.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.2	N.D.	-0.5	-2.8
carbon source	L-Valine (C)	N.D.	+0.2	N.D.	+0.2	-3.7
stress	Polymyxin B sulfate 0.006 mg/ml	N.D.	+0.1	N.D.	-3.3	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.7	N.D.	-0.5	-1.8
phage	JP1 MOI 10	N.D.	+0.2	N.D.	+0.0	-2.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	N.D.	-0.6	-1.5
phage	JP1 MOI 1	N.D.	+0.2	N.D.	+0.4	-3.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	N.D.	-0.1	-1.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.4	N.D.	-0.2	-1.6
phage	JP1 MOI 10	N.D.	-0.0	N.D.	-0.0	-2.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	+0.4	N.D.	-0.5	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-1.1	N.D.	+0.3	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.4	N.D.	-0.7	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+0.3	N.D.	-0.5	-1.5
phage	P. simiae OR Antrim MOI 1	N.D.	+0.3	N.D.	+0.1	-2.1
seeds	Growth on radish seeds for 72 hours	N.D.	+0.4	N.D.	-0.3	-1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-1.1	N.D.	+0.6	-0.6
solid stress	Fraxetin 3 mM; solid stress	N.D.	+0.2	N.D.	+0.9	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-1.0	N.D.	+0.7	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-0.4	N.D.	-0.1	+1.6
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	-0.6	N.D.	+0.2	+1.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.4	N.D.	+0.9	+1.0
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	-0.3	N.D.	+0.4	+1.6
phage	P. simiae OR1 MOI 0.1	N.D.	+0.7	N.D.	+0.7	+0.9
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	+0.2	N.D.	+0.2	+2.0