Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_27225	PS417_27230	PS417_27235	PS417_27240	PS417_27245
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.1	-0.2	+0.3	-5.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.1	-0.2	-0.3	-3.9
stress	Polymyxin B sulfate 0.006 mg/ml	+0.1	+0.2	-0.4	-0.0	-4.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.0	+0.1	-0.4	-4.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	-0.2	-0.0	+0.1	-4.2
stress	Gentamicin 0.008 mg/ml	-0.5	-0.4	+0.1	+0.2	-3.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.3	-0.6	+0.1	-2.6
stress	Benzalkonium Chloride 0.012 mg/ml	-0.4	+0.2	+0.1	+0.1	-4.0
soil	soil sample 7; outgrowth in LB	-0.5	-0.1	+0.9	+0.3	-4.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.0	+0.2	-0.2	-0.3	-3.6
soil	soil sample 2; outgrowth in LB	-0.2	-0.2	-0.3	+0.5	-3.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	-0.1	+0.3	+0.3	-5.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.5	+0.3	-0.1	-3.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4	-0.1	+0.2	+0.2	-3.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.2	-0.0	-0.2	+0.1	-3.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.6	-0.3	+0.1	-4.2
soil	soil sample 5; outgrowth in LB	+0.4	+0.5	-0.6	+0.7	-4.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.0	-0.8	-0.1	+0.5	-2.8
carbon source	octanoate (C)	+0.2	-0.2	+0.5	+0.0	-3.3
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.2	-0.2	-0.7	+0.6	-2.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	-0.9	+0.5	+0.0	-3.0
supernatant control	Vogels_fungal_media 0.1X	+0.3	-0.8	+0.1	+0.4	-2.7
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.2	-0.3	+1.2	+0.3	-3.6
soil	soil sample 6; outgrowth in LB	+0.3	-0.4	-0.0	+0.7	-3.0
soil	soil sample 8; outgrowth in LB	+0.3	+0.3	-0.1	+0.5	-3.0
root	root sample 6; outgrowth in LB	+0.7	-0.3	+0.2	+0.5	-2.6
stress	methylglyoxal 0.032 vol%	-0.8	+0.1	+0.5	+0.3	+3.3
stress	Phosphomycin 0.001 mg/ml	+0.3	+0.1	-0.1	-0.1	+3.8
carbon source	L-Valine (C)	+0.4	+0.6	+0.3	-0.1	+3.6
carbon source	L-Valine (C)	-0.4	+0.1	+1.4	+0.4	+4.2