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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5315 and GFF5316 are separated by 74 nucleotides
GFF5316 and GFF5317 overlap by 23 nucleotides
GFF5317 and GFF5318 are separated by 109 nucleotides
GFF5318 and GFF5319 are separated by 159 nucleotides
GFF5315 - secreted alkaline phosphatase, at 5,308,220 to 5,309,716
GFF5315
GFF5316 - Catalase KatE-intracellular protease (EC 1.11.1.6), at 5,309,791 to 5,311,254
GFF5316
GFF5317 - hypothetical protein, at 5,311,232 to 5,312,098
GFF5317
GFF5318 - hypothetical protein, at 5,312,208 to 5,312,426
GFF5318
GFF5319 - Mobile element protein, at 5,312,586 to 5,312,693
GFF5319
Group
Condition
GFF5315
GFF5316
GFF5317
GFF5318
GFF5319
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
-0.1
-0.7
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
-0.0
-0.6
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.2
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.2
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
+0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.1
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.2
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.0
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
+0.1
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
+0.2
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
+0.2
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.4
+0.1
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.1
+0.3
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.4
+0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.3
+0.4
+0.8
N.D.
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