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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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500 nt
GFF5309 and GFF5310 are separated by 73 nucleotides
GFF5310 and GFF5311 are separated by 166 nucleotides
GFF5311 and GFF5312 overlap by 4 nucleotides
GFF5312 and GFF5313 are separated by 116 nucleotides
GFF5309 - GTP-binding protein EngB, at 185,231 to 185,971
GFF5309
GFF5310 - Cytochrome c4, at 186,045 to 186,725
GFF5310
GFF5311 - Cytochrome c-type biogenesis protein Ccs1/ResB, at 186,892 to 189,012
GFF5311
GFF5312 - Cytochrome c-type biogenesis protein CcsA/ResC, at 189,009 to 190,325
GFF5312
GFF5313 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 190,442 to 191,467
GFF5313
Group
Condition
GFF5309
GFF5310
GFF5311
GFF5312
GFF5313
complex community
Community=Locust bean gum; Passage=4
N.D.
-1.3
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-1.1
N.D.
N.D.
+0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
-1.2
N.D.
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-1.0
N.D.
N.D.
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-1.0
N.D.
N.D.
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-1.0
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-1.0
N.D.
N.D.
+0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
-1.1
N.D.
N.D.
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-0.9
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
-1.0
N.D.
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
N.D.
-0.9
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-1.0
N.D.
N.D.
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
N.D.
-0.9
N.D.
N.D.
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
-0.9
N.D.
N.D.
+0.0
vitamin
M9 with Supernatant from Cyptococcus
N.D.
-0.7
N.D.
N.D.
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
-0.8
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-0.7
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
-0.7
N.D.
N.D.
+0.0
complex community
Community=guar; Passage=4
N.D.
-0.8
N.D.
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
N.D.
-0.8
N.D.
N.D.
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
N.D.
-0.7
N.D.
N.D.
-0.0
complex community
Community=guar; Passage=4
N.D.
-0.7
N.D.
N.D.
+0.0
complex community
Community=Locust bean gum; Passage=4
N.D.
-0.7
N.D.
N.D.
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
-0.7
N.D.
N.D.
+0.1
vitamin
M9 with Supernatant from Cyptococcus
N.D.
-0.7
N.D.
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
-0.6
N.D.
N.D.
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
N.D.
-0.7
N.D.
N.D.
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
N.D.
-0.6
N.D.
N.D.
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
N.D.
-0.6
N.D.
N.D.
+0.1
complex community
Community=arabino-guar; Passage=4
N.D.
-0.8
N.D.
N.D.
+0.3
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