Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5296 and GFF5297 overlap by 4 nucleotidesGFF5297 and GFF5298 are separated by 171 nucleotidesGFF5298 and GFF5299 are separated by 71 nucleotidesGFF5299 and GFF5300 are separated by 57 nucleotides GFF5296 - putative iron-regulated membrane protein, at 169,982 to 171,154 GFF5296 GFF5297 - hypothetical protein, at 171,151 to 171,345 GFF5297 GFF5298 - FIG01204242: hypothetical protein, at 171,517 to 173,733 GFF5298 GFF5299 - TonB-dependent receptor, at 173,805 to 175,940 GFF5299 GFF5300 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 175,998 to 176,873 GFF5300
Group Condition GFF5296 GFF5297 GFF5298 GFF5299 GFF5300
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. +0.1 -0.7 +0.1
complex community Community=guar; Passage=4 +0.1 N.D. -0.1 -0.2 -0.5
phage phage_bap4 -0.3 N.D. -0.3 -0.1 -0.0
phage phage_bap4 -0.0 N.D. -0.0 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.3 N.D. +0.1 +0.7 -0.7
phage phage_bap4 +0.1 N.D. +0.1 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 N.D. -0.0 -0.1 +0.4
complex community Community=arabino-guar; Passage=4 -0.1 N.D. +0.2 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 N.D. +0.1 -0.2 +0.5
complex community Community=guar; Passage=4 -0.2 N.D. +0.1 -0.1 +0.4
complex community Community=guar; Passage=4 +0.2 N.D. +0.2 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. +0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 N.D. -0.1 +0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.1 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 N.D. +0.1 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. +0.0 -0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.0 N.D. +0.2 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 N.D. -0.0 -0.0 +0.1
no phage control no phage control +0.1 N.D. +0.2 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 N.D. -0.1 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. +0.1 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 N.D. -0.1 +0.0 +0.4
complex community Community=Kojac gum; Passage=4 +0.3 N.D. -0.1 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.1 +0.1 +0.5
no phage control no phage control +0.1 N.D. +0.2 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 N.D. -0.1 +0.1 +0.9
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. +0.1 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.0 +0.6 +0.3
complex community Community=arabino-guar; Passage=4 +0.5 N.D. +0.3 +0.1 +0.4
complex community Community=guar; Passage=4 +0.5 N.D. -0.1 +0.7 +0.4
remove
GFF5296
plot		 remove
GFF5297
plot		 remove
GFF5298		 remove
GFF5299
plot		 remove
GFF5300
plot