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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5289 and GFF5290 are separated by 137 nucleotides
GFF5290 and GFF5291 are separated by 208 nucleotides
GFF5291 and GFF5292 are separated by 6 nucleotides
GFF5292 and GFF5293 are separated by 23 nucleotides
GFF5289 - hypothetical protein, at 160,669 to 161,424
GFF5289
GFF5290 - hypothetical protein, at 161,562 to 161,909
GFF5290
GFF5291 - Ferrichrome-iron receptor, at 162,118 to 164,268
GFF5291
GFF5292 - no description, at 164,275 to 164,778
GFF5292
GFF5293 - N-carbamoyl-L-amino acid hydrolase (EC 3.5.1.87), at 164,802 to 166,052
GFF5293
Group
Condition
GFF5289
GFF5290
GFF5291
GFF5292
GFF5293
complex community
Community=Locust bean gum; Passage=4
-1.3
-0.6
+0.3
-1.4
+0.2
complex community
Community=Locust bean gum; Passage=4
-1.3
-0.5
+0.3
-0.0
-0.6
complex community
Community=Kojac gum; Passage=1
-0.5
+0.1
+0.1
-0.4
-0.5
complex community
Community=arabino-guar; Passage=4
-1.6
+0.3
+0.3
+0.6
-1.0
complex community
Community=Kojac gum; Passage=4
-0.9
+0.3
+0.1
-0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.0
+0.1
+0.1
+0.0
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.5
+0.8
+0.3
-0.0
-1.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.5
-0.2
+0.1
-0.3
+0.3
complex community
Community=Locust bean gum; Passage=4
+1.2
+0.2
+0.2
-1.4
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.0
+0.3
+0.2
+0.0
+0.1
phage
phage_bap4
+0.3
-0.2
-0.1
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.8
+0.1
+0.1
+0.0
+0.2
vitamin
M9 with Supernatant from Cyptococcus
-0.7
+0.2
+0.0
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.5
+0.2
+0.1
-0.1
+0.3
vitamin
M9 with Supernatant from Cyptococcus
-0.4
+0.3
+0.1
+0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.6
+0.4
+0.2
-0.2
+0.3
no phage control
no phage control
+0.3
+0.2
+0.1
+0.2
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.5
+0.0
+0.2
+0.6
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
+0.3
+0.1
+0.2
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.4
+0.2
+0.2
+0.4
+0.2
complex community
Community=guar; Passage=4
-0.1
+0.2
+0.3
-0.3
+0.7
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
+0.0
+0.0
-0.1
+0.6
vitamin
M9 with Supernatant from Cyptococcus
-0.2
+0.3
-0.0
+0.3
+0.5
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.1
+0.2
+0.5
+0.4
complex community
Community=guar; Passage=4
+0.3
+0.4
+0.2
-0.3
+0.5
vitamin
M9 with Supernatant from Cyptococcus
+0.4
+0.2
+0.1
+0.3
+0.2
no phage control
no phage control
+0.9
+0.1
-0.0
+0.2
+0.1
complex community
Community=guar; Passage=4
+1.2
+0.2
+0.1
-0.1
+0.0
complex community
Community=guar; Passage=4
-0.2
+0.8
-0.0
+0.2
+0.7
complex community
Community=arabino-guar; Passage=4
+1.1
+0.2
+0.1
+0.4
+0.5
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