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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5278 and GFF5279 are separated by 125 nucleotides
GFF5279 and GFF5280 are separated by 945 nucleotides
GFF5280 and GFF5281 overlap by 4 nucleotides
GFF5281 and GFF5282 are separated by 97 nucleotides
GFF5278 - GNAT family acetyltransferase PA5433, at 5,269,661 to 5,270,335
GFF5278
GFF5279 - Transcriptional regulator, LysR family, at 5,270,461 to 5,270,988
GFF5279
GFF5280 - hypothetical protein, at 5,271,934 to 5,272,179
GFF5280
GFF5281 - hypothetical protein, at 5,272,176 to 5,272,463
GFF5281
GFF5282 - hypothetical protein, at 5,272,561 to 5,272,851
GFF5282
Group
Condition
GFF5278
GFF5279
GFF5280
GFF5281
GFF5282
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
+0.3
+0.4
-0.9
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.1
+0.3
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.4
+0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
-0.0
+0.7
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.0
+0.4
-0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.0
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.3
+0.0
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.1
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.2
-0.1
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
+0.4
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.3
+0.2
+0.6
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
+0.2
+0.0
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.3
-0.0
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.2
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.3
+0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.3
+0.3
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.2
-0.0
+0.8
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.1
+0.3
+0.3
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