Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF524 and GFF525 are separated by 98 nucleotidesGFF525 and GFF526 are separated by 131 nucleotidesGFF526 and GFF527 overlap by 4 nucleotidesGFF527 and GFF528 are separated by 18 nucleotides GFF524 - Tripartite tricarboxylate transporter TctB family, at 566,752 to 567,288 GFF524 GFF525 - Tripartite tricarboxylate transporter TctC family, at 567,387 to 568,346 GFF525 GFF526 - Tricarboxylate transport transcriptional regulator TctD, at 568,478 to 569,158 GFF526 GFF527 - Tricarboxylate transport sensor protein TctE, at 569,155 to 570,585 GFF527 GFF528 - Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog), at 570,604 to 571,038 GFF528
Group Condition GFF524 GFF525 GFF526 GFF527 GFF528
no phage control no phage control -0.4 -0.1 -0.3 -0.7 -0.3
no phage control no phage control -0.5 -0.2 -0.2 -0.3 -0.3
no phage control no phage control -0.6 -0.2 -0.3 -0.4 -0.0
phage phage_bap4 -0.5 -0.2 -0.5 -0.3 +0.1
phage phage_bap4 -0.3 -0.3 -0.1 -0.5 -0.0
no phage control no phage control -0.3 -0.2 -0.2 -0.1 -0.5
phage phage_bap4 -0.3 -0.3 -0.2 -0.5 +0.0
complex community Community=arabino-guar; Passage=4 -0.4 -0.1 +0.2 +0.1 -0.6
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 -0.3 +0.3 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 +0.0 -0.0 -0.2 -0.4
phage phage_bap4 -0.5 -0.1 -0.1 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.2 -0.3 -0.6
phage phage_bap4 +0.0 +0.2 -0.2 -0.2 -0.5
complex community Community=Locust bean gum; Passage=1 -0.4 +0.0 +0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.2 -0.1 +0.0 -0.5
complex community Community=guar; Passage=4 -0.0 +0.5 -0.1 -0.1 -0.6
phage phage_bap4 -0.0 +0.3 -0.1 +0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.0 -0.2 -0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 -0.0 +0.1 -0.5
complex community Community=Kojac gum; Passage=4 -0.2 +0.0 -0.2 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 +0.2 -0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.3 +0.1 -0.3 -0.1
complex community Community=Kojac gum; Passage=1 -0.3 +0.1 +0.1 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 +0.3 +0.2 -0.2
complex community Community=guar; Passage=4 -0.3 +0.4 +0.4 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.3 +0.3 +0.4 -0.5
complex community Community=guar; Passage=4 +0.1 +0.4 -0.0 +0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 +0.1 +0.8 -0.0 -0.5
complex community Community=guar; Passage=4 +0.8 +0.2 +0.5 +0.4 -0.9
complex community Community=Locust bean gum; Passage=4 +0.4 +0.0 +0.1 +0.0 +0.4
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