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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5257 and GFF5258 are separated by 94 nucleotides
GFF5258 and GFF5259 overlap by 1 nucleotides
GFF5259 and GFF5260 are separated by 73 nucleotides
GFF5260 and GFF5261 are separated by 18 nucleotides
GFF5257 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 122,543 to 123,580
GFF5257
GFF5258 - hypothetical protein, at 123,675 to 123,854
GFF5258
GFF5259 - Na+/solute symporter, at 123,854 to 125,359
GFF5259
GFF5260 - Uncharacterized protein ygiD, at 125,433 to 126,341
GFF5260
GFF5261 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 126,360 to 127,832
GFF5261
Group
Condition
GFF5257
GFF5258
GFF5259
GFF5260
GFF5261
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.1
+0.0
+0.0
-4.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
+0.0
+0.1
+0.1
-4.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.0
+0.2
+0.2
-4.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.1
+0.2
+0.2
-4.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.3
+0.1
-0.1
-4.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.1
+0.1
+0.0
-3.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
+0.0
+0.2
-0.2
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
+0.1
+0.1
-3.9
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.0
+0.2
+0.2
-3.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.1
+0.2
+0.1
-3.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.2
+0.2
+0.3
-4.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
+0.0
+0.2
+0.2
-3.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.1
+0.2
+0.1
-3.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
+0.0
+0.1
+0.3
-3.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.0
+0.1
+0.1
-3.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.0
+0.2
+0.0
-3.4
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.2
+0.0
+0.1
-3.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.0
+0.1
+0.1
+0.3
-3.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.3
+0.1
+0.1
-3.4
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
+0.2
+0.2
+0.1
-3.4
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.1
+0.2
+0.2
-3.5
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.2
+0.1
+0.3
-3.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
+0.0
+0.2
+0.2
-3.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.0
+0.1
+0.1
+0.3
-3.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
+0.2
+0.1
+0.2
-3.2
vitamin
M9 with Supernatant from Cyptococcus
-0.1
+0.2
+0.1
+0.3
-2.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
+0.2
+0.1
+0.2
-3.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.0
+0.1
+0.2
+0.3
-3.0
vitamin
M9 with Supernatant from Cyptococcus
+0.1
+0.3
+0.1
+0.3
-3.3
vitamin
M9 with Supernatant from Cyptococcus
+0.1
-0.1
+0.1
+0.1
-2.5
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