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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5251 and GFF5252 overlap by 22 nucleotides
GFF5252 and GFF5253 are separated by 65 nucleotides
GFF5253 and GFF5254 overlap by 8 nucleotides
GFF5254 and GFF5255 are separated by 168 nucleotides
GFF5251 - Death on curing protein, Doc toxin, at 5,245,969 to 5,246,274
GFF5251
GFF5252 - Prevent host death protein, Phd antitoxin, at 5,246,253 to 5,246,525
GFF5252
GFF5253 - hypothetical protein, at 5,246,591 to 5,247,034
GFF5253
GFF5254 - Mobilization protein, at 5,247,027 to 5,247,302
GFF5254
GFF5255 - Mobilization protein MobA @ Conjugal transfer protein TraA, at 5,247,471 to 5,248,682
GFF5255
Group
Condition
GFF5251
GFF5252
GFF5253
GFF5254
GFF5255
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-2.3
-3.2
-2.0
-1.1
-1.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.9
-1.9
-1.4
-1.6
-1.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.3
-1.7
-1.0
-1.3
-2.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.2
-1.4
-1.5
-1.1
-2.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.2
-1.9
-1.5
-1.4
-1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.2
-1.6
-1.3
-1.7
-1.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.5
-0.3
-1.7
-1.4
-1.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
-0.4
-1.4
-1.7
-1.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.9
+0.1
-1.4
-1.4
-2.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.0
-2.2
-0.7
-0.9
-1.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
-1.7
-1.1
-0.8
-1.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-1.0
-0.7
-1.1
-1.0
-1.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.8
-1.6
-1.0
-0.6
-1.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-1.3
-1.2
-0.8
-0.6
-1.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.8
-1.2
-0.7
-0.8
-1.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-1.5
-0.7
-1.0
-1.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-1.5
-0.7
-0.8
-0.8
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-1.3
-0.7
-0.8
-0.9
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