Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5250 and GFF5251 are separated by 395 nucleotidesGFF5251 and GFF5252 are separated by 184 nucleotidesGFF5252 and GFF5253 are separated by 1 nucleotidesGFF5253 and GFF5254 are separated by 31 nucleotides GFF5250 - 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, coq7 type, at 114,134 to 114,649 GFF5250 GFF5251 - Outer membrane porin protein 32 precursor, at 115,045 to 116,331 GFF5251 GFF5252 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 116,516 to 117,496 GFF5252 GFF5253 - Amidohydrolase family protein, at 117,498 to 118,769 GFF5253 GFF5254 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 118,801 to 120,384 GFF5254
Group Condition GFF5250 GFF5251 GFF5252 GFF5253 GFF5254
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.1 -0.3 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.0 -0.1 -0.4
complex community Community=guar; Passage=4 N.D. N.D. -0.4 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.3 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.0 -0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.3 -0.0 +0.1
phage phage_bap4 N.D. N.D. -0.3 +0.1 -0.0
phage phage_bap4 N.D. N.D. -0.2 -0.1 +0.1
phage phage_bap4 N.D. N.D. -0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.2 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.2 -0.6 +0.3
complex community Community=guar; Passage=4 N.D. N.D. -0.1 -0.1 +0.1
complex community Community=Kojac gum; Passage=1 N.D. N.D. +0.1 -0.1 -0.0
complex community Community=guar; Passage=4 N.D. N.D. +0.1 -0.1 +0.0
phage phage_bap4 N.D. N.D. -0.2 +0.2 +0.0
complex community Community=Kojac gum; Passage=4 N.D. N.D. -0.4 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.1 +0.0 +0.1
phage phage_bap4 N.D. N.D. -0.2 +0.1 +0.2
phage phage_bap4 N.D. N.D. -0.2 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.2 -0.1 +0.0
phage phage_bap4 N.D. N.D. -0.1 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.4 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.0 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.2 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.0 +0.5 -0.0
complex community Community=guar; Passage=4 N.D. N.D. +0.1 +0.3 +0.2
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