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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF523 and GFF524 are separated by 67 nucleotides
GFF524 and GFF525 are separated by 30 nucleotides
GFF525 and GFF526 are separated by 10 nucleotides
GFF526 and GFF527 are separated by 125 nucleotides
GFF523 - hypothetical protein, at 520,492 to 520,647
GFF523
GFF524 - hypothetical protein, at 520,715 to 522,163
GFF524
GFF525 - Benzoate transport protein, at 522,194 to 523,378
GFF525
GFF526 - benzoate MFS transporter BenK, at 523,389 to 524,717
GFF526
GFF527 - Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family), at 524,843 to 525,766
GFF527
Group
Condition
GFF523
GFF524
GFF525
GFF526
GFF527
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.1
-0.2
-0.5
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.1
-0.1
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.3
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.1
+0.0
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.0
-0.1
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
-0.2
-0.3
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.1
-0.1
-0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
-0.3
-0.1
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.0
+0.0
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.0
+0.2
-0.2
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.0
-0.0
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
-0.0
-0.2
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-0.1
+0.0
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.1
+0.1
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
-0.2
-0.2
-0.0
+0.4
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