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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5244 and GFF5245 are separated by 136 nucleotides
GFF5245 and GFF5246 are separated by 67 nucleotides
GFF5246 and GFF5247 are separated by 74 nucleotides
GFF5247 and GFF5248 are separated by 109 nucleotides
GFF5244 - General secretion pathway protein G, at 108,079 to 108,570
GFF5244
GFF5245 - FIG00771430: hypothetical protein, at 108,707 to 109,186
GFF5245
GFF5246 - Threonine dehydratase biosynthetic (EC 4.3.1.19), at 109,254 to 110,834
GFF5246
GFF5247 - hypothetical protein, at 110,909 to 112,039
GFF5247
GFF5248 - Outer membrane porin protein 32 precursor, at 112,149 to 113,330
GFF5248
Group
Condition
GFF5244
GFF5245
GFF5246
GFF5247
GFF5248
complex community
Community=Locust bean gum; Passage=4
-0.6
-0.7
-3.7
-0.3
+0.3
complex community
Community=guar; Passage=4
-0.3
-0.6
-3.6
-0.1
-0.0
complex community
Community=arabino-guar; Passage=4
-0.1
-0.1
-4.3
-0.1
+0.0
complex community
Community=guar; Passage=4
-0.1
-0.4
-3.9
-0.1
+0.0
complex community
Community=guar; Passage=4
+0.0
-0.0
-4.1
+0.0
+0.2
complex community
Community=guar; Passage=4
-0.1
+0.1
-3.4
-0.3
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.1
-0.0
-3.6
+0.1
+0.1
complex community
Community=Kojac gum; Passage=4
+0.3
+1.0
-4.3
-0.6
+0.1
complex community
Community=arabino-guar; Passage=4
+0.3
+0.1
-3.6
-0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.2
-4.1
+0.1
+0.4
complex community
Community=arabino-guar; Passage=4
+0.2
+0.3
-4.0
+0.2
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.0
-3.5
-0.1
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
-0.1
-2.1
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
+0.2
-2.7
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.0
-2.2
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.0
-2.3
-0.2
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.1
-2.1
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
+0.2
-2.1
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
+0.2
-2.2
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
+0.2
-2.3
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
+0.1
-2.0
-0.2
-0.0
complex community
Community=arabino-guar; Passage=4
+0.1
+0.7
-3.4
+0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.0
-1.9
-0.1
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
+0.1
-1.9
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.1
-1.8
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
-2.0
+0.0
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
+0.0
-1.6
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
+0.1
-1.2
-0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
+0.2
-1.3
-0.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.0
-1.6
+0.1
+0.0
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