Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5235 and GFF5236 are separated by 5 nucleotidesGFF5236 and GFF5237 are separated by 10 nucleotidesGFF5237 and GFF5238 overlap by 4 nucleotidesGFF5238 and GFF5239 are separated by 4 nucleotides GFF5235 - General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD), at 100,555 to 102,846 GFF5235 GFF5236 - General secretion pathway protein N, at 102,852 to 103,652 GFF5236 GFF5237 - General secretion pathway protein M, at 103,663 to 104,205 GFF5237 GFF5238 - General secretion pathway protein L, at 104,202 to 105,269 GFF5238 GFF5239 - hypothetical protein, at 105,274 to 105,504 GFF5239
Group Condition GFF5235 GFF5236 GFF5237 GFF5238 GFF5239
complex community Community=Locust bean gum; Passage=4 +0.0 N.D. N.D. -0.0 -2.9
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. N.D. -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 N.D. N.D. -0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 N.D. N.D. -0.5 -0.2
complex community Community=guar; Passage=4 +0.5 N.D. N.D. -0.3 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. N.D. -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. N.D. -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 N.D. N.D. -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 N.D. N.D. +0.1 -0.4
complex community Community=arabino-guar; Passage=4 +0.7 N.D. N.D. -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 N.D. N.D. +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. N.D. -0.2 +0.2
phage phage_bap4 +0.3 N.D. N.D. +0.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.4 N.D. N.D. -0.3 +0.2
phage phage_bap4 +0.2 N.D. N.D. +0.3 -0.2
phage phage_bap4 -0.1 N.D. N.D. +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. N.D. -0.1 +0.3
phage phage_bap4 +0.1 N.D. N.D. +0.0 +0.4
complex community Community=guar; Passage=4 +0.7 N.D. N.D. -0.6 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 N.D. N.D. +0.3 -0.0
phage phage_bap4 +0.3 N.D. N.D. +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 N.D. N.D. +0.7 -0.2
no phage control no phage control +0.2 N.D. N.D. +0.4 +0.3
complex community Community=arabino-guar; Passage=4 +0.4 N.D. N.D. +1.1 -0.6
complex community Community=guar; Passage=4 +0.2 N.D. N.D. +0.2 +0.6
complex community Community=Locust bean gum; Passage=4 +0.5 N.D. N.D. +0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.9 N.D. N.D. -0.3 +0.4
complex community Community=arabino-guar; Passage=4 +0.2 N.D. N.D. +0.8 +0.6
complex community Community=guar; Passage=4 +0.4 N.D. N.D. +0.6 +0.7
complex community Community=Kojac gum; Passage=4 +1.5 N.D. N.D. +0.4 +1.1
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