Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5233 and GFF5234 are separated by 15 nucleotidesGFF5234 and GFF5235 are separated by 58 nucleotidesGFF5235 and GFF5236 are separated by 5 nucleotidesGFF5236 and GFF5237 are separated by 10 nucleotides GFF5233 - General secretion pathway protein F / Type II secretory pathway, component PulF, at 97,851 to 99,089 GFF5233 GFF5234 - General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase), at 99,105 to 100,496 GFF5234 GFF5235 - General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD), at 100,555 to 102,846 GFF5235 GFF5236 - General secretion pathway protein N, at 102,852 to 103,652 GFF5236 GFF5237 - General secretion pathway protein M, at 103,663 to 104,205 GFF5237
Group Condition GFF5233 GFF5234 GFF5235 GFF5236 GFF5237
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.6 +0.0 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.5 +0.1 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.1 -0.7 +0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.6 +0.1 N.D. N.D.
no phage control no phage control -0.2 -0.3 +0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.5 +0.2 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.4 +0.0 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.1 +0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.3 +0.0 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 +0.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.3 +0.2 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.5 -0.4 +0.0 N.D. N.D.
complex community Community=guar; Passage=4 -0.4 +0.0 +0.5 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.1 +0.3 N.D. N.D.
phage phage_bap4 -0.1 +0.2 +0.3 N.D. N.D.
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.4 N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 +0.4 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.1 +0.2 N.D. N.D.
complex community Community=guar; Passage=4 -0.0 +0.3 +0.2 N.D. N.D.
phage phage_bap4 +0.2 +0.2 +0.2 N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.5 +0.1 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.1 +0.3 +0.2 N.D. N.D.
phage phage_bap4 +0.2 +0.2 +0.3 N.D. N.D.
complex community Community=guar; Passage=4 +0.2 -0.2 +0.7 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.4 +0.0 N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.4 +0.2 N.D. N.D.
complex community Community=guar; Passage=4 +0.5 +0.5 +0.4 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.3 +0.7 +0.9 N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.5 +0.8 +0.7 N.D. N.D.
complex community Community=Kojac gum; Passage=4 +1.1 +1.8 +1.5 N.D. N.D.
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