Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_26660 and PS417_26665 are separated by 12 nucleotidesPS417_26665 and PS417_26670 are separated by 46 nucleotidesPS417_26670 and PS417_26675 are separated by 239 nucleotidesPS417_26675 and PS417_26680 are separated by 77 nucleotides PS417_26660: PS417_26660 - protein PilI, at 5,765,619 to 5,766,143 _26660 PS417_26665: PS417_26665 - chemotaxis protein CheY, at 5,766,156 to 5,766,521 _26665 PS417_26670: PS417_26670 - pilus assembly protein PilG, at 5,766,568 to 5,766,975 _26670 PS417_26675: PS417_26675 - glutathione synthetase, at 5,767,215 to 5,768,168 _26675 PS417_26680: PS417_26680 - energy transducer TonB, at 5,768,246 to 5,769,151 _26680
Group Condition PS417_26660 PS417_26665 PS417_26670 PS417_26675 PS417_26680
stress Gentamicin 0.008 mg/ml -2.6 N.D. N.D. N.D. N.D.
ecofab LB in EcoFAB_3.5mL -1.7 N.D. N.D. N.D. N.D.
phage Wcs_1 -1.7 N.D. N.D. N.D. N.D.
carbon source L-Valine (C) -1.7 N.D. N.D. N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.5 N.D. N.D. N.D. N.D.
stress Spectinomycin 0.4 mg/ml -1.4 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 1 +1.4 N.D. N.D. N.D. N.D.
phage P. simiae Grant Run MOI 10 +1.4 N.D. N.D. N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.4 N.D. N.D. N.D. N.D.
phage JP1 MOI 10 +1.4 N.D. N.D. N.D. N.D.
phage P. simiae Grant Run MOI 0.1 +1.5 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 1 +1.5 N.D. N.D. N.D. N.D.
phage P. simiae Grant Run MOI 0.1 +1.5 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 10 +1.6 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 0.1 +1.6 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 0.1 +1.6 N.D. N.D. N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +1.6 N.D. N.D. N.D. N.D.
phage P. simiae OR Antrim MOI 10 +1.6 N.D. N.D. N.D. N.D.
stress LB_noSalt with Chloride 500 mM +1.7 N.D. N.D. N.D. N.D.
phage P. simiae Grant Run MOI 10 +1.7 N.D. N.D. N.D. N.D.
nophagecontrol Only library +1.7 N.D. N.D. N.D. N.D.
stress LB_noSalt with Chloride 500 mM +1.7 N.D. N.D. N.D. N.D.
phage JP1 MOI 10 +2.0 N.D. N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium chloride 200 mM +2.1 N.D. N.D. N.D. N.D.
phage JP1 MOI 0.1 +2.1 N.D. N.D. N.D. N.D.
phage JP1 MOI 1 +2.1 N.D. N.D. N.D. N.D.
phage JP1 MOI 1 +2.2 N.D. N.D. N.D. N.D.
stress Choline chloride 300 mM +2.2 N.D. N.D. N.D. N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +2.5 N.D. N.D. N.D. N.D.
stress methylglyoxal 0.032 vol% +2.9 N.D. N.D. N.D. N.D.
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