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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5197 and GFF5198 are separated by 345 nucleotides
GFF5198 and GFF5199 overlap by 4 nucleotides
GFF5199 and GFF5200 are separated by 135 nucleotides
GFF5200 and GFF5201 are separated by 34 nucleotides
GFF5197 - putative plasmid stabilization protein, at 5,194,235 to 5,196,010
GFF5197
GFF5198 - hypothetical protein, at 5,196,356 to 5,197,714
GFF5198
GFF5199 - hypothetical protein, at 5,197,711 to 5,198,316
GFF5199
GFF5200 - Multicopper oxidase, at 5,198,452 to 5,198,592
GFF5200
GFF5201 - sigma-24 (FecI-like) protein, at 5,198,627 to 5,199,193
GFF5201
Group
Condition
GFF5197
GFF5198
GFF5199
GFF5200
GFF5201
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.1
-0.2
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.3
+0.4
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.3
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.3
+0.4
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.0
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
+0.1
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.4
+0.2
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
+0.2
+0.1
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.3
+0.1
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.3
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.2
+0.3
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.3
+0.5
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.3
+0.4
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.2
+0.1
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.4
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.5
+0.4
+0.6
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.3
+0.4
+0.4
+0.5
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