Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_26595	PS417_26600	PS417_26605	PS417_26610	PS417_26615
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	-3.3	N.D.	+0.1
phage	JP1 MOI 10	N.D.	-0.0	-3.3	N.D.	-0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	-0.1	-3.5	N.D.	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	N.D.	-0.4	-2.5	N.D.	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.0	-3.5	N.D.	+0.2
phage	P. simiae OR Antrim MOI 10	N.D.	-0.4	-2.8	N.D.	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	+0.1	-3.7	N.D.	+0.5
phage	JP1 MOI 1	N.D.	-0.4	-2.4	N.D.	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-3.2	N.D.	+0.5
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	-0.2	-2.7	N.D.	-0.1
no phage control	Time6-nophage	N.D.	-0.3	-3.1	N.D.	+0.6
carbon source	Carbon source L-Ornithine 5 mM	N.D.	-0.0	-2.5	N.D.	-0.2
nophagecontrol	Only library	N.D.	+0.0	-2.5	N.D.	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	-2.4	N.D.	+0.2
soil	soil sample 8; outgrowth in LB	N.D.	-0.1	-2.7	N.D.	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-1.4	N.D.	-0.9
stress	Phosphomycin 0.001 mg/ml	N.D.	+0.1	-2.0	N.D.	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.5	-2.1	N.D.	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	N.D.	+0.1	-1.7	N.D.	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.8X; growth supplemented with 0.4X LB	N.D.	+0.2	-2.4	N.D.	-0.0
solid stress	Fraxetin 0.5 mM; solid stress	N.D.	+0.2	-2.1	N.D.	-0.2
solid stress	80% Methanol 3 mM; solid stress	N.D.	+0.1	-2.4	N.D.	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	-1.8	N.D.	+0.4
solid stress	80% Methanol 1 mM; solid stress	N.D.	+0.2	-2.2	N.D.	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.2	-2.1	N.D.	+0.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+0.5	-2.3	N.D.	+0.7
motility	outer cut, LB soft agar motility assay	N.D.	+0.6	-1.7	N.D.	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-0.6	+0.9	N.D.	+1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.4	+1.7	N.D.	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.5	+2.2	N.D.	+0.1