Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5190 and GFF5191 are separated by 114 nucleotidesGFF5191 and GFF5192 are separated by 144 nucleotidesGFF5192 and GFF5193 are separated by 41 nucleotidesGFF5193 and GFF5194 are separated by 12 nucleotides GFF5190 - L-arabinose 1-dehydrogenase (EC 1.1.1.376), at 48,205 to 48,978 GFF5190 GFF5191 - Galactose-binding protein regulator, at 49,093 to 50,052 GFF5191 GFF5192 - 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26), at 50,197 to 51,663 GFF5192 GFF5193 - Galactofuranose ABC transporter, substrate-binding protein, at 51,705 to 52,670 GFF5193 GFF5194 - L-arabinose ABC transporter, substrate-binding protein AraF, at 52,683 to 53,753 GFF5194
Group Condition GFF5190 GFF5191 GFF5192 GFF5193 GFF5194
complex community Community=Locust bean gum; Passage=4 -0.3 -2.4 -0.3 +0.8 -0.5
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 +0.1 -1.0 -0.1
phage phage_bap4 -0.1 -0.3 -0.3 -0.4 -0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.2 +0.0 -1.2 +0.0
complex community Community=Locust bean gum; Passage=4 +0.2 -0.4 -0.3 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.2 +0.1 -0.6 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.7 -0.0 -0.1 +0.2
complex community Community=guar; Passage=4 +0.1 +0.9 +0.3 -0.9 -1.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 -0.2 +0.1 -0.6 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 -0.1 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.2 -0.0 -0.8 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.2 +0.2 -0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.6 +0.1 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 -0.2 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.5 -0.0 -0.3 +0.2
no phage control no phage control -0.2 +0.5 +0.1 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.9 +0.6 +0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.3 -0.2 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.5 -0.1 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 +0.5 +0.6 +0.6 -1.2 -0.2
complex community Community=guar; Passage=4 +0.4 -0.4 +0.5 +0.0 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 -0.8 -0.3 +2.1 -0.4
complex community Community=Kojac gum; Passage=1 +0.0 +0.0 +0.1 +0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.5 +0.0 +0.2 +0.6
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.1 +1.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.6 +0.0 +0.5 +0.0
phage phage_bap4 +0.2 +0.3 +0.3 +0.2 +0.1
complex community Community=guar; Passage=4 +0.3 +0.8 -0.0 +0.4 +0.6
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 +0.9 +0.5 +0.7
complex community Community=guar; Passage=4 +0.0 +0.6 +0.4 +1.3 -0.0
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