Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF517 and GFF518 are separated by 56 nucleotidesGFF518 and GFF519 are separated by 145 nucleotidesGFF519 and GFF520 overlap by 4 nucleotidesGFF520 and GFF521 overlap by 4 nucleotides GFF517 - no description, at 556,577 to 556,915 GFF517 GFF518 - Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains, at 556,972 to 558,504 GFF518 GFF519 - Transcriptional regulator, AcrR family, at 558,650 to 559,345 GFF519 GFF520 - Efflux transport system, outer membrane factor (OMF) lipoprotein, at 559,342 to 560,868 GFF520 GFF521 - Secretion protein HlyD precursor, at 560,865 to 562,001 GFF521
Group Condition GFF517 GFF518 GFF519 GFF520 GFF521
complex community Community=arabino-guar; Passage=4 +0.3 -0.6 -0.3 +0.1 -0.9
complex community Community=arabino-guar; Passage=4 -0.3 -0.5 -0.2 +0.6 -0.7
complex community Community=Locust bean gum; Passage=4 +0.3 -0.6 -0.5 -0.1 -0.2
complex community Community=Kojac gum; Passage=4 +0.0 -1.0 +0.2 +0.1 -0.4
phage phage_bap4 -0.2 -0.4 +0.1 -0.1 -0.2
complex community Community=Kojac gum; Passage=1 +0.0 -0.0 -0.1 -0.0 -0.6
complex community Community=Locust bean gum; Passage=4 -0.1 -0.0 -0.2 +0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 -0.2 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.2 -0.0 +0.2 -0.4
phage phage_bap4 -0.1 -0.1 +0.2 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.2 +0.2 +0.0
complex community Community=guar; Passage=4 +0.4 -0.2 -0.1 +0.3 -0.4
complex community Community=guar; Passage=4 +0.3 -0.1 +0.0 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.3 +0.2 +0.0 +0.2
complex community Community=guar; Passage=4 +0.5 -0.1 -0.0 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 +0.0 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.2 +0.0 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.1 -0.2 +0.2 +0.1
no phage control no phage control +0.0 +0.1 +0.2 +0.1 -0.2
complex community Community=guar; Passage=4 +0.1 +0.2 +0.3 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.2 +0.1 +0.1 +0.3
phage phage_bap4 +0.1 -0.1 +0.3 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.1 -0.1 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.2 -0.0 +0.0 +0.5 -0.1
no phage control no phage control +0.1 +0.0 +0.1 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 +0.3 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.0 +0.1 +0.5 +0.3 -0.0
complex community Community=arabino-guar; Passage=4 +0.4 +0.1 -0.2 +0.3 +0.2
phage phage_bap4 +0.2 +0.2 +0.0 +0.0 +0.4
remove
GFF517
plot		 remove
GFF518
plot		 remove
GFF519		 remove
GFF520
plot		 remove
GFF521
plot