Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_26480	PS417_26485	PS417_26490	PS417_26495	PS417_26500
solid stress	Fraxetin 3 mM; solid stress	-0.7	-0.1	+0.1	+0.2	-5.1
solid stress	Fraxetin 3 mM; solid stress	-0.7	+0.1	+0.1	-0.1	-4.9
solid stress	Fraxetin 3 mM; solid stress	-0.5	+0.0	-0.3	-0.0	-3.4
solid stress	Fraxetin 3 mM; solid stress	-0.4	+0.2	-0.2	+0.1	-3.4
solid stress	Fraxetin 2 mM; solid stress	-0.4	+0.2	+0.2	+0.1	-3.3
solid stress	Fraxetin 2 mM; solid stress	-0.3	+0.0	+0.0	-0.1	-2.8
solid stress	Fraxetin 2 mM; solid stress	+0.1	+0.1	+0.0	+0.0	-3.3
solid stress	Fraxetin 2 mM; solid stress	-0.1	-0.0	+0.1	-0.3	-2.6
solid stress	Fraxetin 2 mM; solid stress	-0.4	-0.2	+0.2	+0.2	-2.2
solid stress	Fraxetin 1 mM; solid stress	-0.1	-0.1	+0.1	-0.3	-1.1
liquid stress	Fraxetin 3 mM; liquid stress	+0.2	-0.1	-0.0	+0.1	-1.3
liquid stress	Fraxetin 3 mM; liquid stress	+0.3	-0.4	-0.1	+0.0	-1.0
agar plate interaction control	Taped volatile agar plate with no fungus	-0.6	+0.5	-0.1	+0.1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.6	+0.3	-0.3	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4	+0.1	-0.1	-0.2	-0.9
liquid stress	Fraxetin 3 mM; liquid stress	+0.3	-0.2	+0.3	-0.1	-1.0
phage	JP1 MOI 0.1	+0.4	-0.5	-0.6	-0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	+0.3	+0.0	-0.1	-0.8
soil	soil sample 3; outgrowth in LB	-0.9	+0.3	-0.1	+0.0	+0.4
carbon source	L-Valine (C)	-0.2	-0.4	+0.5	+0.4	-0.3
phage	P. simiae Grant Run MOI 0.1	-0.6	+0.3	-0.4	+0.4	+0.6
phage	JP1 MOI 10	-0.3	-0.4	+0.1	+0.1	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	-0.6	-0.2	+0.5	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	-0.2	+0.5	-0.4	+1.0
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+1.4	-0.0	-0.3	-0.2
phage	P. simiae OR Antrim MOI 1	+0.5	+0.7	-0.6	+0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	+0.7	-0.1	+0.2	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	+0.2	+0.5	+0.3	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+1.2	-0.1	+0.0	-0.2	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	+0.2	+0.2	+0.0	+0.9