Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5168 and GFF5169 are separated by 15 nucleotidesGFF5169 and GFF5170 are separated by 31 nucleotidesGFF5170 and GFF5171 are separated by 8 nucleotidesGFF5171 and GFF5172 are separated by 138 nucleotides GFF5168 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 20,607 to 21,377 GFF5168 GFF5169 - hypothetical protein, at 21,393 to 22,247 GFF5169 GFF5170 - N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157), at 22,279 to 23,706 GFF5170 GFF5171 - Transcriptional regulator, AsnC family, at 23,715 to 24,206 GFF5171 GFF5172 - Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16), at 24,345 to 26,225 GFF5172
Group Condition GFF5168 GFF5169 GFF5170 GFF5171 GFF5172
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.2 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.0 -0.3 N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=1 -0.0 -0.2 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.2 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.2 -0.4 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.2 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 N.D. N.D. N.D.
complex community Community=guar; Passage=4 +0.1 -0.1 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.1 N.D. N.D. N.D.
phage phage_bap4 +0.2 -0.1 N.D. N.D. N.D.
phage phage_bap4 +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 N.D. N.D. N.D.
phage phage_bap4 +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.0 N.D. N.D. N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 N.D. N.D. N.D.
phage phage_bap4 +0.2 +0.0 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 N.D. N.D. N.D.
phage phage_bap4 +0.2 +0.0 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -0.0 +0.3 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.2 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 +0.5 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.6 +0.2 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 +0.7 +0.2 N.D. N.D. N.D.
remove
GFF5168
plot		 remove
GFF5169
plot		 remove
GFF5170		 remove
GFF5171
plot		 remove
GFF5172
plot