Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF513 and GFF514 are separated by 54 nucleotidesGFF514 and GFF515 are separated by 15 nucleotidesGFF515 and GFF516 are separated by 144 nucleotidesGFF516 and GFF517 overlap by 4 nucleotides GFF513 - Chitinase (EC 3.2.1.14), at 553,323 to 554,780 GFF513 GFF514 - no description, at 554,835 to 554,957 GFF514 GFF515 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 554,973 to 556,160 GFF515 GFF516 - hypothetical protein, at 556,305 to 556,580 GFF516 GFF517 - no description, at 556,577 to 556,915 GFF517
Group Condition GFF513 GFF514 GFF515 GFF516 GFF517
complex community Community=arabino-guar; Passage=4 +0.0 N.D. -0.1 N.D. -0.3
complex community Community=Kojac gum; Passage=4 -0.2 N.D. -0.3 N.D. +0.0
phage phage_bap4 -0.1 N.D. +0.0 N.D. -0.2
complex community Community=guar; Passage=4 -0.0 N.D. -0.3 N.D. +0.1
complex community Community=Kojac gum; Passage=1 -0.1 N.D. -0.0 N.D. +0.0
complex community Community=arabino-guar; Passage=4 +0.0 N.D. -0.2 N.D. +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.0 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.0 N.D. -0.3 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 N.D. +0.1 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 N.D. +0.1 N.D. +0.0
complex community Community=guar; Passage=4 -0.3 N.D. -0.1 N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 N.D. +0.1 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. +0.1 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 N.D. -0.1 N.D. -0.0
phage phage_bap4 -0.0 N.D. +0.1 N.D. -0.1
no phage control no phage control +0.1 N.D. -0.1 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. -0.1 N.D. +0.3
complex community Community=arabino-guar; Passage=4 -0.1 N.D. -0.2 N.D. +0.4
phage phage_bap4 +0.1 N.D. +0.1 N.D. -0.0
no phage control no phage control +0.1 N.D. +0.0 N.D. +0.0
phage phage_bap4 +0.1 N.D. +0.0 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 +0.1 N.D. +0.1 N.D. +0.0
no phage control no phage control +0.1 N.D. +0.0 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 N.D. +0.2 N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. -0.0 N.D. +0.1
phage phage_bap4 -0.0 N.D. +0.2 N.D. +0.2
phage phage_bap4 +0.0 N.D. +0.1 N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.3 N.D. +0.3 N.D. +0.3
complex community Community=guar; Passage=4 +0.2 N.D. -0.1 N.D. +0.3
complex community Community=guar; Passage=4 +0.1 N.D. +0.0 N.D. +0.5
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