Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_26365	PS417_26370	PS417_26375	PS417_26380	PS417_26385
stress	Cisplatin 0.01 mg/ml	-0.4	-3.8	-0.1	+0.1	-0.0
solid stress	Fraxetin 3 mM; solid stress	-4.7	+0.6	+0.3	-0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	-1.7	-0.5	+0.1	+0.0
solid stress	Fraxetin 3 mM; solid stress	-4.2	+0.7	+0.2	-0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	-2.2	-0.2	-0.3	-0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2	-3.1	-0.1	-0.0	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-3.0	-0.3	+0.1	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	-0.3	-0.4	-0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.0	-2.7	+0.3	-0.3	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.3	-2.3	+0.0	-0.3	-0.2
phage	JP1 MOI 10	-2.3	+0.6	-0.3	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	-2.3	-0.1	+0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-2.3	+0.2	-0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5	-2.2	-0.1	-0.1	-0.1
agar plate interaction control	Taped volatile agar plate with no fungus	+0.4	-2.0	+0.3	-0.2	-0.3
stress	methylglyoxal 0.032 vol%	-0.1	+0.7	-0.1	-1.8	-0.4
solid stress	Fraxetin 3 mM; solid stress	-3.1	+0.9	+0.5	-0.0	+0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.9	-2.8	-0.1	+0.2	+0.3
seeds	Growth on radish seeds for 72 hours	-0.1	-2.1	+0.1	+0.5	+0.2
root	root sample 6; outgrowth in LB	+0.3	-2.1	+0.3	+0.4	-0.1
solid stress	Fraxetin 3 mM; solid stress	-2.0	+0.7	+0.2	+0.0	+0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	-1.5	+1.4	+0.4	-0.6
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.2	-1.6	+0.2	-0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.7	-1.1	+0.3	+0.4	-0.2
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.6	-1.9	+0.5	-0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	-1.3	+0.4	+0.7	+0.0
seeds	Growth on radish seeds for 72 hours	+2.0	-1.3	+0.4	-0.2	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+3.6	-2.1	-0.2	-0.1	+0.0
stress	Doxycycline hyclate 0.001 mg/ml	-0.1	+1.9	+0.3	+0.6	-0.0
stress	Gentamicin 0.008 mg/ml	-0.6	+4.1	+0.9	+0.5	-0.0