Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_26325	PS417_26330	PS417_26335	PS417_26340	PS417_26345
stress	Paraquat dichloride 0.002 mg/ml	+1.0	+2.0	-5.5	-3.2	-2.2
phage	P. simiae OR Antrim MOI 1	-0.2	+0.1	-3.7	-0.1	-1.5
phage	P. simiae ORA MOI 0.1	+0.1	-0.1	-0.5	-2.3	-2.2
stress	Choline chloride 300 mM	-0.3	-0.4	-0.8	-1.3	-2.0
stress	Thallium(I) acetate 0.0625 mg/ml	+2.1	+3.3	-3.5	-3.0	-3.5
stress	Paraquat dichloride 0.008 mg/ml	+2.4	+4.4	-4.6	-3.4	-3.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.0	+0.0	-2.3	-1.3	-0.6
seeds	Growth on radish seeds for 24 hours	-0.5	-0.4	-1.0	-0.6	-1.3
phage	JP1 MOI 10	-0.1	+0.5	-1.7	-1.0	-1.5
liquid stress	80% Methanol 2 mM; liquid stress	+0.1	+0.0	-2.5	-0.4	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	-0.6	-1.3	-0.6	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.4	-0.7	-0.7	-0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	+0.0	-1.3	-1.3	-0.7
phage	P. simiae ORA MOI 10	-0.2	+0.0	-1.2	+0.0	-1.5
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4	+0.4	-1.1	-1.1	-0.5
phage	P. simiae ORA MOI 1	-0.4	-0.2	+0.3	-1.2	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-0.4	-0.4	-1.0	-1.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.3	+0.2	-0.9	-1.6	-0.8
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.2	+0.4	-1.4	-1.0	-0.5
solid stress	Fraxetin 3 mM; solid stress	-0.5	-0.2	-1.4	-0.5	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.0	+0.8	-1.4	-1.1	-0.5
phage	P. simiae ORA MOI 0.1	-0.1	+0.0	+0.8	-2.2	-0.6
phage	P. simiae OR Antrim MOI 0.1	-0.6	-0.3	+0.5	-0.7	-0.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	+0.3	+0.5	-1.4	-0.8	-0.6
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	-0.2	-1.4	+0.8	-0.1
phage	P. simiae OR1 MOI 0.1	-0.5	+0.2	+0.0	+0.5	-1.6
stress	1-ethyl-3-methylimidazolium acetate 35 mM	+0.1	-0.2	-1.5	+1.3	+0.4
rhizosphere	rhizosphere sample 1; outgrowth in LB	+1.3	+0.9	-0.3	-0.3	-0.6
soil	soil sample 4; outgrowth in LB	+2.3	+0.1	-1.0	-0.2	-0.0
soil	soil sample 6; outgrowth in LB	+1.0	+0.1	+1.0	-0.9	+0.4