Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02610	PS417_02615	PS417_02620	PS417_02625	PS417_02630
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	-0.6	N.D.	N.D.	-2.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.2	-0.1	N.D.	N.D.	-2.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.6	N.D.	N.D.	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.6	N.D.	N.D.	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.4	N.D.	N.D.	-1.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.7	-0.4	N.D.	N.D.	-1.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.6	N.D.	N.D.	-0.9
phage	P. simiae OR Antrim MOI 1	-0.2	+0.2	N.D.	N.D.	-2.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.5	N.D.	N.D.	-1.3
phage	JP1 MOI 10	+0.0	+0.3	N.D.	N.D.	-2.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.0	N.D.	N.D.	-1.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	+0.0	N.D.	N.D.	-1.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.5	-0.3	N.D.	N.D.	-1.2
phage	JP1 MOI 1	+0.3	-0.2	N.D.	N.D.	-2.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.3	N.D.	N.D.	-1.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.6	N.D.	N.D.	-0.7
solid stress	80% Methanol 0.5 mM; solid stress	-0.2	-0.4	N.D.	N.D.	-1.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.2	N.D.	N.D.	-1.1
root	root sample 6; outgrowth in LB	+0.2	-0.1	N.D.	N.D.	-1.5
agar plate interaction control	Taped volatile agar plate with no fungus	+0.2	+0.1	N.D.	N.D.	-1.7
agar plate interaction control	Taped volatile agar plate with no fungus	-0.3	+0.4	N.D.	N.D.	-1.3
stress	Polymyxin B sulfate 0.006 mg/ml	-0.1	+0.4	N.D.	N.D.	-1.4
phage	P. simiae ORA MOI 0.1	+0.1	+0.6	N.D.	N.D.	-1.6
stress	Neomycin 0.04 mg/ml	+0.4	+0.1	N.D.	N.D.	-1.4
seeds	Growth on radish seeds for 72 hours	+0.5	+0.5	N.D.	N.D.	-1.8
stress	Gentamicin 0.008 mg/ml	+0.4	+0.6	N.D.	N.D.	-1.5
phage	P. simiae Grant Run MOI 0.1	+0.5	+0.5	N.D.	N.D.	-0.9
stress	methylglyoxal 0.032 vol%	-0.3	+0.3	N.D.	N.D.	+1.3
seeds	Growth on radish seeds for 72 hours	-0.0	+1.8	N.D.	N.D.	+0.9
phage	P. simiae OR1 MOI 0.1	+0.8	+1.0	N.D.	N.D.	+1.3