Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5133 and GFF5134 are separated by 57 nucleotidesGFF5134 and GFF5135 overlap by 1 nucleotidesGFF5135 and GFF5136 are separated by 87 nucleotidesGFF5136 and GFF5137 are separated by 1 nucleotides GFF5133 - hypothetical protein, at 232,573 to 233,625 GFF5133 GFF5134 - Chromosome partition protein smc, at 233,683 to 237,153 GFF5134 GFF5135 - DNA repair exonuclease family protein YhaO, at 237,153 to 238,409 GFF5135 GFF5136 - Putative DNA helicase, at 238,497 to 243,143 GFF5136 GFF5137 - no description, at 243,145 to 243,342 GFF5137
Group Condition GFF5133 GFF5134 GFF5135 GFF5136 GFF5137
complex community Community=guar; Passage=4 -0.1 -0.1 -0.3 +0.2 -1.2
complex community Community=Kojac gum; Passage=1 +0.0 -0.0 -0.1 -0.2 -0.4
complex community Community=arabino-guar; Passage=4 +0.2 -0.0 -0.4 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.1 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 +0.0 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 +0.1 +0.0 -0.6
complex community Community=arabino-guar; Passage=4 +0.1 -0.0 -0.4 +0.2 -0.4
complex community Community=Kojac gum; Passage=4 -0.4 +0.1 +0.1 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.1 -0.1 +0.0 +0.1 -0.2
no phage control no phage control +0.1 +0.1 -0.2 -0.1 -0.2
complex community Community=guar; Passage=4 -0.2 +0.3 +0.2 -0.6 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.1 -0.1 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.0 +0.3 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 +0.5 +0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.2 -0.2 -0.0 +0.2
phage phage_bap4 +0.1 -0.1 +0.0 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.0 +0.1 -0.1 +0.4
complex community Community=guar; Passage=4 +0.3 +0.1 +0.3 +0.0 -0.3
phage phage_bap4 +0.2 -0.0 -0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 -0.1 +0.2 +0.2
phage phage_bap4 +0.3 +0.2 +0.0 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.0 +0.0 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.1 +0.1 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 +0.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 +0.1 -0.0 +0.3
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 +0.5 +0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.1 +0.0 +0.4
phage phage_bap4 +0.3 +0.1 -0.1 +0.2 +0.2
phage phage_bap4 +0.2 +0.1 +0.1 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.0 -0.1 +0.3 +0.5
remove
GFF5133
plot
remove
GFF5134
plot
remove
GFF5135
remove
GFF5136
plot
remove
GFF5137
plot