Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_26225 and PS417_26230 are separated by 10 nucleotidesPS417_26230 and PS417_26235 overlap by 1 nucleotidesPS417_26235 and PS417_26240 are separated by 183 nucleotidesPS417_26240 and PS417_26245 are separated by 15 nucleotides PS417_26225: PS417_26225 - electron transfer flavoprotein subunit beta, at 5,668,044 to 5,668,814 _26225 PS417_26230: PS417_26230 - electron transfer flavoprotein subunit alpha, at 5,668,825 to 5,670,045 _26230 PS417_26235: PS417_26235 - (Fe-S)-binding protein, at 5,670,045 to 5,671,985 _26235 PS417_26240: PS417_26240 - N-methylproline demethylase, at 5,672,169 to 5,674,229 _26240 PS417_26245: PS417_26245 - hypothetical protein, at 5,674,245 to 5,674,775 _26245
Group Condition PS417_26225 PS417_26230 PS417_26235 PS417_26240 PS417_26245
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.7 -3.9 -2.8 -2.2 -0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 -2.3 -3.3 -3.6 -0.2
root root sample 6; outgrowth in LB -1.9 -3.2 -2.5 -3.3 -1.1
soil soil sample 5; outgrowth in LB -1.7 -1.7 -2.7 -4.9 -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 -1.3 -1.6 -3.7 -1.0
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.9 -2.8 -1.7 -1.9 +0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.1 -1.3 -1.9 -4.4 +0.6
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 -2.6 -2.6 -1.3 -0.7
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.1 -2.3 -2.2 -0.6 -0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.2 -2.1 -1.9 -1.9 -0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -3.3 -1.0 -1.4 -1.8 -0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.7 -1.8 -1.0 -0.9 -0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.2 -0.7 -1.1 -3.6 -0.2
soil soil sample 3; outgrowth in LB -0.8 -0.5 -0.5 -4.9 +0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.5 -0.8 -1.1 -1.4 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.4 -1.9 -1.6 -0.7 +0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.5 -1.6 -1.3 -0.7 -0.7
soil soil sample 8; outgrowth in LB -0.9 -1.9 -1.6 -1.0 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.7 -1.2 -1.4 -0.9 -1.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -2.1 -1.7 +0.0 -0.8
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -0.9 -1.5 -1.1 -0.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.8 -1.3 -1.7 -0.3 +0.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -0.5 -1.0 -1.1 -0.8
seeds Growth on radish seeds for 72 hours -1.1 -1.1 -0.1 -1.3 -0.9
soil soil sample 4; outgrowth in LB -0.7 -1.1 -1.6 -0.7 -0.4
soil soil sample 2; outgrowth in LB -0.3 -1.4 -1.3 -0.9 -0.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.9 -1.4 -1.4 -0.6 +0.3
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.4 -1.6 -0.4 +1.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -1.0 -0.7 -0.8 -1.2 +0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.8 -1.3 -0.6 +0.8 -0.8
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PS417_26225
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PS417_26230
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PS417_26240
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PS417_26245
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