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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF510 and GFF511 are separated by 142 nucleotides
GFF511 and GFF512 are separated by 20 nucleotides
GFF512 and GFF513 overlap by 4 nucleotides
GFF513 and GFF514 are separated by 70 nucleotides
GFF510 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 178,147 to 179,022
GFF510
GFF511 - expressed protein, at 179,165 to 180,586
GFF511
GFF512 - Small uncharacterized protein Bpro_4170, at 180,607 to 180,957
GFF512
GFF513 - Enoyl-CoA hydratase (EC 4.2.1.17), at 180,954 to 181,745
GFF513
GFF514 - Esterase/lipase, at 181,816 to 182,778
GFF514
Group
Condition
GFF510
GFF511
GFF512
GFF513
GFF514
carbon source
Ying_all64 rep C; time point 3
+0.0
+0.0
N.D.
-1.1
-0.0
carbon source
Ying_sugar7 rep C; time point 3
-0.1
-0.1
N.D.
-0.2
-0.2
carbon source
Ying_all64 rep A; time point 2
+0.1
-0.2
N.D.
-0.3
+0.1
carbon source
Ying_Others16 rep A; time point 2
+0.2
-0.2
N.D.
+0.4
-0.0
carbon source
Ying_sugar7 rep A; time point 2
+0.0
-0.1
N.D.
+0.5
+0.0
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.0
+0.3
N.D.
+0.4
-0.2
carbon source
Ying_Nucleobase14 rep C; time point 2
+0.1
+0.1
N.D.
+0.3
-0.0
carbon source
Ying_Others16 rep A; time point 3
+0.6
-0.1
N.D.
-0.1
+0.2
carbon source
Ying_all64 rep C; time point 2
+0.1
+0.0
N.D.
+0.4
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
+0.1
N.D.
+0.5
+0.2
carbon source
Ying_Others16 rep C; time point 1
+0.1
-0.2
N.D.
+0.8
+0.0
carbon source
Ying_sugar7 rep B; time point 1
+0.1
+0.1
N.D.
+0.2
+0.2
carbon source
Ying_all64 rep C; time point 1
+0.0
+0.1
N.D.
+0.6
+0.0
carbon source
Ying_all64 rep B; time point 2
+0.1
+0.2
N.D.
+0.3
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 2
+0.1
-0.0
N.D.
+0.6
+0.0
carbon source
Ying_Nucleobase14 rep B; time point 2
-0.0
+0.3
N.D.
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
-0.0
N.D.
+0.6
+0.1
carbon source
Ying_sugar7 rep B; time point 2
+0.1
+0.2
N.D.
+0.4
+0.1
carbon source
Ying_Others16 rep A; time point 1
+0.0
-0.1
N.D.
+0.9
-0.0
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.0
+0.1
N.D.
+0.7
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.0
+0.0
N.D.
+0.7
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.1
-0.0
N.D.
+0.9
-0.1
carbon source
Ying_sugar7 rep C; time point 2
+0.1
+0.1
N.D.
+0.7
-0.0
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.1
+0.3
N.D.
+0.4
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.1
+0.1
N.D.
+0.6
+0.2
carbon source
Ying_Others16 rep B; time point 2
+0.0
+0.3
N.D.
+0.6
+0.1
carbon source
Ying_OrganicAcid7 rep C; time point 1
-0.0
+0.1
N.D.
+1.0
+0.0
carbon source
Ying_AminoAcid20 rep A; time point 2
-0.1
+0.2
N.D.
+1.0
+0.1
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.2
+0.1
N.D.
+0.8
+0.2
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.1
+0.4
N.D.
+0.8
+0.3
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