Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_02595	PS417_02600	PS417_02605	PS417_02610	PS417_02615
phage	JP1 MOI 10	-0.2	+0.1	-0.1	-0.3	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.0	-0.4	-0.7	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.2	-0.3	-1.2	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	+0.2	-0.4	-0.6	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+0.3	-0.1	-1.0	-0.6
supernatant control	Vogels_fungal_media 0.1X	-0.1	+0.3	-0.2	-0.2	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.5	-0.1	-0.6	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.0	+0.1	-0.6	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	-0.2	-0.2	-0.9	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.2	-0.1	-0.8	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	+0.6	+0.2	-0.3	-0.6
soil	soil sample 5; outgrowth in LB	+0.3	-0.7	+0.1	+0.3	-0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6	-1.0	+0.0	+0.0	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.6	+0.1	-0.4	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	-0.2	-0.0	+0.5	-0.7
phage	P. simiae ORA MOI 10	-0.4	-0.4	-0.2	+0.2	+0.6
stress	methylglyoxal 0.032 vol%	-0.5	+0.4	+0.0	-0.3	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.4	-0.6	+0.1	-0.0	+0.4
phage	P. simiae ORA MOI 0.1	+0.3	-0.6	+0.0	-0.1	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.5	+0.2	-0.9	+0.0
carbon source	2'-Deoxyinosine 5 mM (C)	+0.3	-0.7	+0.1	+0.1	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	+0.5	+0.0	-0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.3	+1.1	-0.1	-0.5	+0.1
phage	P. simiae OR1 MOI 0.1	-0.2	-0.9	+0.2	+0.8	+1.0
phage	P. simiae Grant Run MOI 0.1	+0.4	-0.4	+0.0	+0.5	+0.5
seeds	Growth on radish seeds for 24 hours	+0.3	-0.1	+0.1	-0.1	+0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.2	+0.0	-0.3	+0.8	+0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.9	+0.1	+0.2	-0.0
seeds	Growth on radish seeds for 72 hours	+0.6	-0.1	+0.1	+0.5	+0.5
seeds	Growth on radish seeds for 72 hours	+0.5	+0.5	+0.6	-0.0	+1.8