Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5107 and GFF5108 overlap by 47 nucleotidesGFF5108 and GFF5109 overlap by 4 nucleotidesGFF5109 and GFF5110 are separated by 178 nucleotidesGFF5110 and GFF5111 are separated by 64 nucleotides GFF5107 - Transcriptional regulator, LysR family, at 208,618 to 209,568 GFF5107 GFF5108 - FIG00348319: hypothetical protein, at 209,522 to 210,280 GFF5108 GFF5109 - Alanine racemase (EC 5.1.1.1), at 210,277 to 211,380 GFF5109 GFF5110 - Putative transmembrane protein, at 211,559 to 212,863 GFF5110 GFF5111 - Permease of the drug/metabolite transporter (DMT) superfamily, at 212,928 to 213,818 GFF5111
Group Condition GFF5107 GFF5108 GFF5109 GFF5110 GFF5111
complex community Community=Locust bean gum; Passage=4 +0.1 +0.1 N.D. N.D. -0.6
no phage control no phage control +0.1 +0.0 N.D. N.D. -0.3
no phage control no phage control -0.1 -0.2 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.2 -0.1 N.D. N.D. +0.2
complex community Community=arabino-guar; Passage=4 -0.1 -0.4 N.D. N.D. +0.4
complex community Community=guar; Passage=4 -0.1 +0.2 N.D. N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 N.D. N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 N.D. N.D. -0.2
complex community Community=guar; Passage=4 +0.1 +0.5 N.D. N.D. -0.4
complex community Community=arabino-guar; Passage=4 -0.5 +0.3 N.D. N.D. +0.4
complex community Community=Locust bean gum; Passage=1 +0.2 +0.2 N.D. N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.1 N.D. N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.2 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.2 N.D. N.D. -0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 N.D. N.D. +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 N.D. N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 N.D. N.D. +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.1 N.D. N.D. +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 N.D. N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 +0.2 N.D. N.D. +0.0
complex community Community=guar; Passage=4 +0.5 -0.0 N.D. N.D. +0.0
no phage control no phage control -0.0 +0.2 N.D. N.D. +0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 N.D. N.D. +0.3
complex community Community=guar; Passage=4 +0.2 +0.2 N.D. N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.3 N.D. N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.2 N.D. N.D. +0.4
phage phage_bap4 +0.1 +0.3 N.D. N.D. +0.2
complex community Community=Kojac gum; Passage=4 +0.6 -0.0 N.D. N.D. +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 +0.6 N.D. N.D. +0.8
complex community Community=Locust bean gum; Passage=4 +0.2 +0.5 N.D. N.D. +0.7
remove
GFF5107
plot		 remove
GFF5108
plot		 remove
GFF5109		 remove
GFF5110
plot		 remove
GFF5111
plot