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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5095 and GFF5096 are separated by 85 nucleotides
GFF5096 and GFF5097 are separated by 13 nucleotides
GFF5097 and GFF5098 are separated by 11 nucleotides
GFF5098 and GFF5099 are separated by 11 nucleotides
GFF5095 - hypothetical protein, at 198,018 to 198,353
GFF5095
GFF5096 - similar to protocatechuate 4,5-dioxygenase beta chain, at 198,439 to 199,266
GFF5096
GFF5097 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10), at 199,280 to 199,687
GFF5097
GFF5098 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-), at 199,699 to 200,502
GFF5098
GFF5099 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52), at 200,514 to 201,335
GFF5099
Group
Condition
GFF5095
GFF5096
GFF5097
GFF5098
GFF5099
complex community
Community=Kojac gum; Passage=4
+0.3
-0.3
-2.4
-0.6
-0.2
complex community
Community=Locust bean gum; Passage=4
-1.2
-0.3
-1.0
-0.2
-0.3
complex community
Community=guar; Passage=4
-0.2
+0.2
-3.0
+0.5
-0.2
complex community
Community=guar; Passage=4
+0.0
-1.4
-0.4
-0.7
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.1
-1.4
+0.5
-1.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.5
-0.9
-0.4
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
-1.2
-0.2
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.3
-0.6
-0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.3
-0.9
-0.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.0
-0.2
-1.0
-0.1
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
+0.0
-0.6
-0.3
-0.2
complex community
Community=guar; Passage=4
-0.0
-0.5
-1.0
+0.5
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.6
-0.3
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.3
-0.4
-0.4
+0.3
complex community
Community=Locust bean gum; Passage=4
+0.4
-0.9
-1.7
+0.7
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
-0.3
-0.5
-0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.2
-1.0
+0.4
+0.4
complex community
Community=guar; Passage=4
-0.7
-0.0
-0.3
+0.5
+0.0
phage
phage_bap4
-0.0
+0.1
-0.9
+0.4
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.3
-0.6
+0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.7
+0.5
-0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.4
-0.4
+0.6
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.4
-0.2
+0.4
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.3
-0.2
+0.7
-0.2
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.7
+0.3
+0.2
-0.3
phage
phage_bap4
+0.1
+0.1
-0.4
+0.5
+0.2
complex community
Community=arabino-guar; Passage=4
-0.5
+0.3
+0.4
+0.7
-0.3
phage
phage_bap4
-0.1
+0.0
+0.3
+0.3
+0.5
phage
phage_bap4
+0.2
-0.1
+1.0
-0.1
+0.3
complex community
Community=arabino-guar; Passage=4
-0.1
+0.8
+0.8
-0.2
+0.6
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