Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5083 and GFF5084 are separated by 7 nucleotidesGFF5084 and GFF5085 are separated by 184 nucleotidesGFF5085 and GFF5086 are separated by 62 nucleotidesGFF5086 and GFF5087 are separated by 37 nucleotides GFF5083 - Transcriptional regulator, LysR family, at 186,886 to 187,833 GFF5083 GFF5084 - FIG00933367: hypothetical protein, at 187,841 to 188,278 GFF5084 GFF5085 - hypothetical protein, at 188,463 to 188,918 GFF5085 GFF5086 - Glycine betaine transporter OpuD, at 188,981 to 190,495 GFF5086 GFF5087 - DNA repair protein RadA, at 190,533 to 191,927 GFF5087
Group Condition GFF5083 GFF5084 GFF5085 GFF5086 GFF5087
complex community Community=arabino-guar; Passage=4 N.D. -1.1 -0.5 -0.7 -0.2
complex community Community=guar; Passage=4 N.D. -0.7 -0.1 -0.4 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -1.6 +0.6 +0.4
complex community Community=Kojac gum; Passage=4 N.D. -0.7 -0.5 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 N.D. -0.6 -0.0 +0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.1 -0.7 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.4 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.5 -0.2 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.4 -0.1 -0.3 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. -1.0 -0.0 +0.1 +0.2
phage phage_bap4 N.D. -0.0 -0.3 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.5 -0.2 +0.2 -0.1
phage phage_bap4 N.D. -0.3 -0.3 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.3 -0.4 -0.0 +0.1
phage phage_bap4 N.D. -0.2 -0.4 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 N.D. -0.4 -0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.2 -0.3 +0.1 -0.1
no phage control no phage control N.D. -0.3 +0.0 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.4 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.2 +0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.3 -0.1 +0.3 +0.0
complex community Community=arabino-guar; Passage=4 N.D. -0.4 +0.6 +0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.2 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 -0.2 +0.3 -0.1
complex community Community=guar; Passage=4 N.D. -0.4 -0.1 +0.6 -0.2
complex community Community=guar; Passage=4 N.D. +0.2 -0.2 +0.5 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 -0.4 +0.9 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. +0.0 +0.4 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. +0.3 +0.2 +0.2 +0.0
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