Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5082 and GFF5083 are separated by 192 nucleotidesGFF5083 and GFF5084 are separated by 7 nucleotidesGFF5084 and GFF5085 are separated by 184 nucleotidesGFF5085 and GFF5086 are separated by 62 nucleotides GFF5082 - Uncharacterized MFS-type transporter, at 185,380 to 186,693 GFF5082 GFF5083 - Transcriptional regulator, LysR family, at 186,886 to 187,833 GFF5083 GFF5084 - FIG00933367: hypothetical protein, at 187,841 to 188,278 GFF5084 GFF5085 - hypothetical protein, at 188,463 to 188,918 GFF5085 GFF5086 - Glycine betaine transporter OpuD, at 188,981 to 190,495 GFF5086
Group Condition GFF5082 GFF5083 GFF5084 GFF5085 GFF5086
complex community Community=arabino-guar; Passage=4 +0.2 N.D. -1.1 -0.5 -0.7
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. -0.5 -1.6 +0.6
complex community Community=Kojac gum; Passage=4 -0.2 N.D. -0.7 -0.5 -0.1
complex community Community=guar; Passage=4 +0.1 N.D. -0.7 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. -1.0 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 N.D. -0.6 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 N.D. -0.4 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 N.D. -0.1 -0.7 +0.1
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.5 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 N.D. -0.3 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 N.D. -0.4 -0.2 +0.0
phage phage_bap4 +0.0 N.D. -0.2 -0.4 +0.1
phage phage_bap4 +0.0 N.D. -0.3 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.2 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 N.D. -0.3 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 N.D. -0.5 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.3 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 N.D. -0.5 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 N.D. -0.4 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.1 -0.4 +0.2
complex community Community=arabino-guar; Passage=4 +0.2 N.D. -0.4 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. -0.3 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. -0.3 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 N.D. -0.2 -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 N.D. -0.2 +0.2 +0.1
complex community Community=guar; Passage=4 +0.1 N.D. -0.4 -0.1 +0.6
complex community Community=Locust bean gum; Passage=4 -0.0 N.D. -0.3 -0.4 +0.9
complex community Community=arabino-guar; Passage=4 -0.0 N.D. -0.4 +0.6 +0.1
complex community Community=guar; Passage=4 +0.2 N.D. +0.2 -0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. +0.3 +0.2 +0.2
remove
GFF5082
plot		 remove
GFF5083
plot		 remove
GFF5084		 remove
GFF5085
plot		 remove
GFF5086
plot