Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_26030 and PS417_26035 are separated by 223 nucleotidesPS417_26035 and PS417_26040 are separated by 267 nucleotidesPS417_26040 and PS417_26045 are separated by 36 nucleotidesPS417_26045 and PS417_26050 are separated by 127 nucleotides PS417_26030: PS417_26030 - chloramphenical resistance permease RarD, at 5,624,544 to 5,625,428 _26030 PS417_26035: PS417_26035 - glycine cleavage system protein R, at 5,625,652 to 5,626,164 _26035 PS417_26040: PS417_26040 - malate synthase, at 5,626,432 to 5,628,609 _26040 PS417_26045: PS417_26045 - hypothetical protein, at 5,628,646 to 5,629,089 _26045 PS417_26050: PS417_26050 - response regulator, at 5,629,217 to 5,629,663 _26050
Group Condition PS417_26030 PS417_26035 PS417_26040 PS417_26045 PS417_26050
carbon source octanoate (C) -0.1 -0.3 -4.4 -0.2 -0.3
phage JP1 MOI 10 -0.6 -0.2 -0.2 -0.8 -3.0
soil soil sample 5; outgrowth in LB -0.1 -0.6 -1.0 -0.5 -2.3
carbon source L-Histidine (C) -0.9 -0.0 -3.0 -0.0 -0.2
carbon source L-Citrulline (C) -0.1 -0.2 -3.7 -0.0 -0.1
carbon source L-Isoleucine (C) +0.0 +0.1 -3.8 -0.1 -0.3
carbon source L-Histidine (C) -0.8 -0.3 -2.8 +0.0 -0.1
carbon source Ethanol (C) -0.2 +0.0 -3.4 -0.1 -0.3
carbon source L-Leucine (C) +0.0 -0.0 -3.9 +0.2 -0.0
carbon source NAG (C) +0.1 -0.1 -3.3 -0.1 -0.4
carbon source L-Valine (C) +0.1 +0.2 -4.0 -0.1 +0.1
carbon source Gly-Glu (C) +0.1 -0.0 -3.2 -0.1 -0.4
carbon source L-Citrulline (C) -0.2 +0.0 -2.9 -0.2 -0.4
carbon source Carbon source L-Citrulline 5 mM -0.3 +0.0 -3.3 +0.1 -0.1
carbon source L-Tryptophan (C) -0.2 -0.2 -2.9 +0.0 -0.4
carbon source L-Leucine (C) +0.1 -0.0 -3.4 -0.2 +0.1
carbon source Putrescine (C) +0.0 -0.1 -3.7 +0.0 +0.3
carbon source Ethanol (C) +0.1 -0.0 -3.4 -0.1 +0.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.5 -0.5 -1.5 -0.1 -0.7
carbon source octanoate (C) +0.2 +0.1 -3.3 -0.1 -0.1
carbon source Putrescine (C) -0.0 -0.2 -2.7 -0.1 -0.2
carbon source m-Inositol (C) -0.1 -0.2 -2.9 -0.0 +0.1
carbon source Gly-Glu (C) -0.0 -0.1 -3.1 +0.0 +0.3
carbon source NAG (C) +0.2 -0.1 -2.8 +0.1 -0.1
carbon source L-Arginine (C) +0.0 -0.1 -3.0 +0.1 +0.2
carbon source Xylitol (C) +0.1 -0.1 -2.8 -0.0 +0.2
carbon source acetate (C) +0.0 +0.0 -2.8 +0.0 +0.4
carbon source L-Valine (C) -0.2 +0.4 -2.6 +0.2 +0.2
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 +0.2 -2.3 +0.1 +0.5
root root sample 6; outgrowth in LB -0.2 -0.2 -0.7 +0.6 +1.4
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PS417_26030
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PS417_26035
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PS417_26045
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