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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5076 and GFF5077 are separated by 63 nucleotides
GFF5077 and GFF5078 are separated by 165 nucleotides
GFF5078 and GFF5079 are separated by 8 nucleotides
GFF5079 and GFF5080 are separated by 119 nucleotides
GFF5076 - hypothetical protein, at 178,887 to 180,101
GFF5076
GFF5077 - hypothetical protein, at 180,165 to 181,655
GFF5077
GFF5078 - Uncharacterized protein CbuG_0353, at 181,821 to 182,030
GFF5078
GFF5079 - Branched-chain amino acid aminotransferase (EC 2.6.1.42), at 182,039 to 182,992
GFF5079
GFF5080 - DNA recombination-dependent growth factor RdgC, at 183,112 to 184,122
GFF5080
Group
Condition
GFF5076
GFF5077
GFF5078
GFF5079
GFF5080
phage
phage_bap4
-5.1
-0.0
+0.0
+0.0
-0.7
phage
phage_bap4
-4.5
-0.0
+0.0
+0.0
-0.8
phage
phage_bap4
-4.6
-0.0
+0.2
+0.1
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL
-4.9
+0.0
-0.2
-0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-4.2
-0.1
-0.6
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-4.3
+0.0
-0.3
-0.0
+0.1
phage
phage_bap4
-3.9
+0.0
+0.1
+0.1
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL
-4.8
-0.1
-0.1
+0.0
+0.5
complex community
Community=Locust bean gum; Passage=4
-1.8
-0.0
-1.6
-0.4
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-4.7
+0.2
-0.0
+0.0
+0.3
complex community
Community=guar; Passage=4
-2.0
-0.0
-1.3
-0.2
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-4.1
-0.0
-0.2
-0.0
+0.1
complex community
Community=Kojac gum; Passage=4
-1.9
-0.1
-1.6
-0.5
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-4.8
+0.1
+0.1
-0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-4.2
+0.0
-0.0
-0.2
+0.2
complex community
Community=guar; Passage=4
-1.9
-0.2
-0.5
-0.3
-1.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-4.8
-0.0
+0.4
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-4.2
+0.1
-0.2
+0.1
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-4.1
+0.1
+0.0
-0.0
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-4.5
+0.0
+0.2
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-4.6
-0.1
+0.3
+0.0
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-4.3
+0.1
+0.2
+0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-3.6
-0.0
-0.1
+0.1
-0.1
complex community
Community=arabino-guar; Passage=4
-1.8
-0.1
-0.6
-0.6
-0.6
complex community
Community=Locust bean gum; Passage=4
-1.7
+0.1
-0.5
-0.4
-0.8
vitamin
M9 with Supernatant from Cyptococcus
-3.6
+0.1
-0.2
+0.1
+0.1
complex community
Community=guar; Passage=4
-2.2
-0.2
+0.3
-0.3
-0.9
vitamin
M9 with calcium pantothenate 10 mg/mL
-3.1
+0.0
+0.1
-0.0
+0.3
vitamin
M9 with Supernatant from Cyptococcus
-2.9
+0.1
+0.3
+0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-2.6
-0.0
+0.3
-0.0
+0.4
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