Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5069 and GFF5070 are separated by 31 nucleotidesGFF5070 and GFF5071 are separated by 77 nucleotidesGFF5071 and GFF5072 are separated by 95 nucleotidesGFF5072 and GFF5073 overlap by 4 nucleotides GFF5069 - BUG/TctC family periplasmic protein, at 171,212 to 172,180 GFF5069 GFF5070 - Zn-dependent protease with chaperone function, at 172,212 to 173,087 GFF5070 GFF5071 - AmpG permease, at 173,165 to 174,532 GFF5071 GFF5072 - 3-oxoacyl-[ACP] synthase (EC 2.3.1.41) FabV like, at 174,628 to 175,854 GFF5072 GFF5073 - 3-oxoacyl-[ACP] synthase, at 175,851 to 176,690 GFF5073
Group Condition GFF5069 GFF5070 GFF5071 GFF5072 GFF5073
complex community Community=guar; Passage=4 -0.1 -0.2 -2.2 -0.2 +0.1
complex community Community=guar; Passage=4 -0.1 -0.6 -1.3 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 -0.3 +0.0 -0.7 -0.5 -0.2
complex community Community=guar; Passage=4 +0.1 +0.1 -1.9 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 +0.1 -0.1 -1.0 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.1 -0.2 -0.8 +0.4 -0.3
phage phage_bap4 +0.0 -0.6 -0.1 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.2 -0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.4 -0.1 -0.1 +0.1
complex community Community=Kojac gum; Passage=4 -0.0 +0.5 -0.9 -0.0 -0.0
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 -0.4 +0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.3 -0.3 -0.1 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.5 -0.0 +0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.0 -0.1 -0.3 +0.2
phage phage_bap4 -0.2 -0.1 +0.2 -0.2 +0.1
complex community Community=guar; Passage=4 +0.2 +0.3 -0.7 -0.3 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 -0.2 -0.2 -0.1
phage phage_bap4 -0.2 -0.1 +0.5 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 +0.4 -0.9 +0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.4 +0.0 -0.1 -0.1
phage phage_bap4 -0.1 +0.1 +0.3 -0.2 -0.0
phage phage_bap4 +0.0 +0.1 +0.4 -0.0 -0.3
complex community Community=Locust bean gum; Passage=4 -0.0 +0.7 -1.0 +0.2 +0.4
phage phage_bap4 +0.1 -0.0 +0.5 -0.2 -0.1
complex community Community=Locust bean gum; Passage=1 -0.1 +0.3 +0.3 +0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.5 -0.7 +0.4 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.5 -0.1 -0.2 +0.0
phage phage_bap4 -0.0 +0.1 +0.3 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 +0.4 +0.4 -0.5 -0.2 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.4 -0.0 +0.1 +0.1
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